Clone Read LE_HBa0192G19_SP6_108228

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0192G19_SP6_108228
Primer
SP6
ID from Seq. Facility
LE_HBa_192_G19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 868 raw
Sequence
>LE_HBa0192G19_SP6_108228 (raw untrimmed)
GGTCAAAGTGTTGATATCTTCCTCCTTTTACAGAGCGAGAAAGGAAGGGGCTTGCTACCGGGATAAGCAAAACTGTAGAAAGCGGACTATACGGGCTCGT
AGGGGGAGTAGA
ACTTACATCCGCTTGGTAGACATAGACCAAGCCTCATGCAAACCTTGAGAGCTTTTAGTGGAACAATAGAGAAATGTATTCAGCTCCA
TAAAGGTCGCAAATATCCGACAGCTCGAGTTTTACCGTGATTCTTGATGCGTCATACTCTCTTCCGATCGGAGGCGATCATGACGCACACGTGGACAGCA
ATCTCCCTAGCAGACTCTAGCACCGACTGTCTACCCTCCACCAGGTAGCGTTCTCGTCTGCTCCACGCGGCCGAGGCCACGCATATAAAAATGACAATAA
TAGTGCGGAGGCAAACATCTTATCGAAATTTGTATATAAACACTGCAAATAATATCTATATATTAATATAATGATGAGGCTCATGAGATAACATAACTAA
GCAGAATATAGAACAAACAATAATACCACTCAATAACACATGAACATGATACAGCCACAGAAAACACATTCATATCACTAATGAAATAAAATCGATATGA
GTGACGCGTCGTTGTGGCGACAGCAATTGAAGCGACGAGAAGAGTCTGCAGTCTCCTCGCTGTGCGTTACCGCCCTGCGGGGCACCCGCTCTCGCACCCT
CGAAATGCTGTGTGAACGAGTATCATACGGATTGAATGAGACAGACTGGATATCATTGTTGTACGGACTCAGCACTGTATGTCCGCCTACACGAATTGAG
CCCCTAGATCTAACGAGGCAGCTTCACATATGATAGAGCATACAGTTAGTTCACTTATCCTAGTCCTA
>LE_HBa0192G19_SP6_108228 (trimmed for quality and cloning vector)
AC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.880056
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0192G19
Clone
Clone name
hba-192g19
LE_HBa0192G19
P192G19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found