Clone Read LE_HBa0194P23_T7_110197

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0194P23_T7_110197
Primer
T7
ID from Seq. Facility
LE_HBa_194_P23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 823 raw
Sequence
>LE_HBa0194P23_T7_110197 (raw untrimmed)
TTTTTTTTTCCCCCCCTCCTTCCCCTTTCTTGTCGTCGAATNGCATACTAATAAAGTACCCTTTTCCCCCTCCCGCGGTACCCCAACCGTTGCTCTAAGC
GCGTGCAGGGCTCAAGGATCATCGCTCTTCCAAGTAAAGGGGGCCCATAATGCGAACATGGCTCAACGTGCGACAATAAGAATGTGCCGGTGATGTGTGC
GTTGTTCTGCATTGGCAGGTGAATTGCACTGGCAGTTCACTTAATATCCTTGCTATTGATCTCCCCATNGGGGAGGTACCAAGGATTAAGATTGAATATA
TATGTATTTTTAATAATAGGTGGGTGATATTTTGAATTTGTTATTTAAATTAGTTATAGTTAATAAAAAATAAGAATAAATATATGTTCATTTATTTTAT
GTATTTATATTTTTTATTTTTTTTTTCATTTATATTATTTCTGATTTTTATTTTTTTATATTTGTTGTTTTATATTTATTTTATTTTTATTATATGATTA
TATTTTTAATTTTTAGAGGTTGTATGTTTAATTATAATAAAATCAATTTTTTTTTTTTGATTTTTAGTTTTTATATTATATTTTGTTTATTTTTGTATTT
TTTGTTTATTGGTTATGTTTTTAGATTGGTATTCTTATTTATTTTATTTTTTTTTAATATAGATTATTTTATAATTTAGT
TTTTTTTTTTTTTTTCTTAT
ATATATATAATATTTTATAATTGTTTTTTGTTTTAAGAAAATTTTTTTATATTTATGTATTATGTTTGTTATGATTTATAGGTTGTTTTATATTTTATTA
TGTTTGTTTATTATTATATTAAT
>LE_HBa0194P23_T7_110197 (trimmed for quality and cloning vector)
TTTTTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.920595
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0194P23
Clone
Clone name
hba-194p23
LE_HBa0194P23
P194P23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found