Clone Read LE_HBa0197C03_SP6_110300

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0197C03_SP6_110300
Primer
SP6
ID from Seq. Facility
LE_HBa_197_C03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
637 trimmed for vector and quality, 810 raw
Genbank Accession
Sequence
>LE_HBa0197C03_SP6_110300 (raw untrimmed)
TTTCTTATTTTTTTGCTATGGCAGGCGATGATTTGCGTATGAAGCTGTTATACCTTGAAAATAGAGGTAGGATGTCATGTTTCTGCTTACTTCTCTTATT
GTTATACTCTTGTTTCTTAAGATCCAGGCCATTGTATATGATCTTCCACTTAGTTTGCTCCTGCTCCTCTTCTGACAGCCTATCATGAGAATTTCATATT
TAATAACCAGTCTTATTCGCTATGGAAGTTTTAAGTGATATTTTGATGTCTAATGGAGAACAAATCGAGGATGAGTTATACTATTATGTAATGACACATG
GAGGATAACATATACTGTAGTGTCATAACATATGAAGGATGAGATGCTATAGTTTAATATTTCTCAATTACCCTATAAAATTCTTCATATAGTATGCAGG
GGATGGGCGGAAACTGAAATAAACTCAAAGATATGCTTTTCTTAATCTAGAAGTAGCGTAGGATACATATCATGTTGCATGCAATCCACGATTGCGAGGT
CAGTACCTATGAATCGGGGTGGTTCCTTTGTTTGATAATCTTCATCCTCTATACTCTCTCACTCTAGCTTTAGACATTTATCCATGTCACTGATAGTGCT
CTTAAGGCTTAAGTCTATTTCAAGCAGCCTCTTCAGTCCAAGGACTGGGGAGGTAATGTTATGTTAAAATTGCAACTAATTTACCCCCCCACCTGCTTCA
ACTCCTTTTCTGGTATTAGGAAGTGACCTTATATCCCATCCTTTTTTTTCTTTTTTTTTTGTTTTTGAATTTCGGGTGAACCTTTTTGTCTTCTTTTTTC
TCCCCTCATA
>LE_HBa0197C03_SP6_110300 (trimmed for quality and cloning vector)
GCAGGCGATGATTTGCGTATGAAGCTGTTATACCTTGAAAATAGAGGTAGGATGTCATGTTTCTGCTTACTTCTCTTATTGTTATACTCTTGTTTCTTAA
GATCCAGGCCATTGTATATGATCTTCCACTTAGTTTGCTCCTGCTCCTCTTCTGACAGCCTATCATGAGAATTTCATATTTAATAACCAGTCTTATTCGC
TATGGAAGTTTTAAGTGATATTTTGATGTCTAATGGAGAACAAATCGAGGATGAGTTATACTATTATGTAATGACACATGGAGGATAACATATACTGTAG
TGTCATAACATATGAAGGATGAGATGCTATAGTTTAATATTTCTCAATTACCCTATAAAATTCTTCATATAGTATGCAGGGGATGGGCGGAAACTGAAAT
AAACTCAAAGATATGCTTTTCTTAATCTAGAAGTAGCGTAGGATACATATCATGTTGCATGCAATCCACGATTGCGAGGTCAGTACCTATGAATCGGGGT
GGTTCCTTTGTTTGATAATCTTCATCCTCTATACTCTCTCACTCTAGCTTTAGACATTTATCCATGTCACTGATAGTGCTCTTAAGGCTTAAGTCTATTT
CAAGCAGCCTCTTCAGTCCAAGGACTGGGGAGGTAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957599
Expected error %
0.105318
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0197C03
Clone
Clone name
hba-197c3
LE_HBa0197C03
C07HBa0197C03
P197C03
Clone type
BAC
Contamination
none
Estimated length
113,778
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found