Clone Read LE_HBa0131K01_T7_112217

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0131K01_T7_112217
Primer
T7
ID from Seq. Facility
LE_HBa_131_K01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 943 raw
Sequence
>LE_HBa0131K01_T7_112217 (raw untrimmed)
TTTAGCCGGGTCCCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCTCCACAGGGTAGATATCTCTTTAAGGGGAGGACGGGAACNTGCAG
NACGGCATGCGTCCCTTTAGGGGAAAGCCGGGAACGCGGCCAGAGCACCGCGAGCGAGGGACAAAGACAACGGACAAAGACCAGGAACAACACGACAGAG
AGACCCACCACGGACAAGGCACCCGCAAACAGGCCACAGGAGAACCGAGAAGAAGCGCAGACGAGAAGCAACANGAAGAGACAACGAACACGAAGGCAAG
GCAACAACAGCCGCGCGAACCCAAAGACCCCGGCCAGGAACCAAAANGGGCAAGCCAAAAGGNCACAAAGACCCANAGCNAAACGCCCCAGCGAACACGC
GGACAAGGGAGCACAAACACCGGAAAAAAGGCGAAGGACAACGCGCAGGAAGAGGAGAACGAGGAGGAGGGCCCGGCGGACCAGGAAAGCAGACAACGCA
ACACAGACACAAAAAGGACCAACNGAACAGCCAAGAGACCCCGCGACGGAGAAAACAAACGGGACAGGAAACGGCCGACAAACAAAACCCCCCCCACCAA
AAGCCGGAAAGCAAGGAGAAACAGAAACAAAGAACAAGAGGGAAAGCAAAAAACCAACACAAACCAGGAAAACCACACCGAGCGCAGGGAGACACCCAGA
AGCACCGCCACAAACCGAAACGACNCCAAAACCACAAGACCACCGAAGACAGGACCAGCCAACGCGAACGCCCCACACGGAAAAACACGCCACGACCCCG
GGCGCCCACCCCACAGCGAACCGCCGGCCCGAAACGCCGCCCGCAGACCCGGCCGGCACACGAACCGCACGCGGGCCAGAGGCCACCCCGCCCCAGGCAA
ACGCCGGGCACAACGCCCCAACACACCGGGGGCAGAGACGGCA
>LE_HBa0131K01_T7_112217 (trimmed for quality and cloning vector)
AGCTTTCTC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
not recorded
Expected error %
1.435
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0131K01
Clone
Clone name
hba-131k1
LE_HBa0131K01
C10HBa0131K01
P131K01
Clone type
BAC
Contamination
none
Estimated length
77,943
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found