Clone Read LE_HBa0181C24_SP6_112646

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0181C24_SP6_112646
Primer
SP6
ID from Seq. Facility
LE_HBa_181_C24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 784 raw
Sequence
>LE_HBa0181C24_SP6_112646 (raw untrimmed)
CCCCCCCCCACCTCCCCCCCCCCCCCCCTCCTAAAAGGGGGAGCNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNANANNNANNNNNNAA
ANAAAAAAATTACAAGGAGAAAANAANAAAACCAAAAAANAAAAAAAAAAAANAAAAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAANAAA
AAAAAAAANAAANANNAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAANNNNNAAAAAANNNANANANNNANAAATTATTTAANAAANANNANAAANNNAAAAAAAAAAAAANAAAAAAAAAAAANAAAAAAAAAAAAAANAAA
AAAAAAAAAAAAAAAAAAAAANNANNAAAAAAAAAAAANANNNAAAAANAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAANAAAAAAAANAAAANN
ANAAAAAAAAANNAAAAAAAAAAAANAAAAAAANAANACCCCANAAAAAANAAAAAAANANAAAAAAAAAANAAAAACCCCAAAAAAANANNAAAAANAA
AAAAAAAANAAAAANNAAAAAAANNANANAANAAAAAAAAAAAAANNAAAAAAAANAAAAAAAAAAANAAAAAAAAAANAAAAAAAAAAAAAAAAAANAA
AAAAAAANAAAAAAAAAAAAAAAAAAAAAAANAAAAANAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
>LE_HBa0181C24_SP6_112646 (trimmed for quality and cloning vector)
CCCCCCCC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.4434
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0181C24
Clone
Clone name
hba-181c24
LE_HBa0181C24
P181C24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found