Clone Read LE_HBa0188A19_T7_113309

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0188A19_T7_113309
Primer
T7
ID from Seq. Facility
LE_HBa_188_A19-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1198 raw
Sequence
>LE_HBa0188A19_T7_113309 (raw untrimmed)
TCTAGTCTCGACTCTTATAATTAGATGAGAGCCTGAGAGGGAATCTTCTNAGGAGATCCCACTATAGCTAGAGACATTGCCAAGACTCTGTTGTACTCCA
CATAAATTGCTCCCCCTCCTCTATCTAAGAAGCTCTTCAAATGTCCATCTCTAAGCACTGATCACTTGCTCGAAGTGCTCGTATATAAGCTTCAGTAATG
GACACATATACCTGCTTATTATATATACGTAGTCTCGTGCAATCCTTCTCTCCATACCTATGATAAATAGGGACTTAGTTCTCATTCTCAACAATCCTCT
CTTCTCTAATAAAGGTAAACACCCTACTTATAATGGACCAGCAATAATCAGTGGCTAAATTAATAAACCCACACAAGATCATCCACCTCTTAGGCACCTG
AAGTTTCTATGATACAAATCAACAGTTCGCTCTACCCTTGTCAGTTACATTAATTCTTTACATACAACCTTTGTCTCTCGTCCTTCTGCCTTTTAACTCT
TCCCCTCTGCATAAAATCTTCTTGTTACTCTTTACACTTGCATTACACCTTCTTCCACGACAACTTATATCTCTACCATATCAACAATTCTGTTCATCTC
ACTTGTTTCTATAATGTATACTGTAGTTTCTCTCACTCTTATAATCTCCGTGGTATAACCTACATTACCGTCCTTTTTTTATTGTTTTGTTTCTCCCCTC
CCTCCCTATCTAAATCACGATCTTTATGCTGTGCGTCATACTAAAA
AAACAAGTACGTACGACGCTGTTGTTCTGTTTGTCGTATACTTTGTCTACTATG
TTTATAATATATTATGCTCTATTGACTTAGAAATTAGTGGATATATCCTCTATGCATAATTTCCTCACTTTACGTAATACGTTCTAGACTATCACTACTT
TTATTAATTTCCTTCCGCCCTCTCTACCTTCCTATTCTATTATCTACTATTTCTCTGCATAATTCTTCTTCTATTCATGCTCTCCCTCGATGACTCTTGT
CGCGTTTGCCCCGCTTCACTCTTCTCTCTTTCATACACTCTACCTTCGTATGCGCCTCCTCTAACCATCGTCTACACCTTCATCTCTCTGTATTCTTACT
TACTAATATCTCCTTTGCCTCTTTTTATCTTACATCTCTTGTCTCCTCTCATGCTGTTACTATTCTACTGTTATGCTGTTGTAGTCATCCTCTTCATA
>LE_HBa0188A19_T7_113309 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.8966
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0188A19
Clone
Clone name
hba-188a19
LE_HBa0188A19
P188A19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found