Clone Read LE_HBa0191B01_SP6_114088

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191B01_SP6_114088
Primer
SP6
ID from Seq. Facility
LE_HBa_191_B01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
21 trimmed for vector and quality, 802 raw
Sequence
>LE_HBa0191B01_SP6_114088 (raw untrimmed)
CACGAGACAAAGACCTCTGTCAGATCCGTTGGGCCGAAGTGAAAAGTCATAAAATGTACTTCATCCCTCCTAATTTATATAACTTTTTTCCTATAGGTCG
TTCCCAAGAATGTTATCTTTTTTCATTTGGTCTTTATTTAATGACACCATATCCAATTTATTTTTATGGTTTCATTTAACGTTTTAATGCAAAAAGTAAA
GCACTACTATGACTTGAATAACATAT
TTTAATAAATATATCAAAATCTTCATTTCCTCTCAAATCTTCATCCATAATGACACATGAATGGAGAGTGAGGA
GTAATATTTCACCGAGAGTATAAACATCGTATTCTAGAAGGCAATGCACCTAAAGGAAATTTGGGATTCCAGTTCGGTCTAATCCCCACGTAGGACGTAA
AAATGATTGTGTTCAGCCTCCTGAAAGTAATAAAATCTAATTGCCGAGGCTCTTCAACGACTACGCGAAAACACCCGTCCCGACCCCCCTATCACACCCA
CCATTCCATGGAGGTCGTTTGCCTTATGAGAATACCATTTCAAATGTCACCTATCTCTAAAAAAAGGAGCAGGCTCTCGATCAAACCAACAGTTCCTGGA
TTCTCCCATCACCCCATCTTTACTTTAATTTTTCCCTGCTTATCACTATTCCGCACACCACCCTACTTCTTTTACCTACTAGCACATTCTCCAACAGACC
ACATACCGTTTATCATCTTAAGTTCATTTGTTTTCTATTTTATAGCTACCCATCTAAACTTAATCTTTCTTTCACATTATAACTGTTATACTCTCCACTA
AA
>LE_HBa0191B01_SP6_114088 (trimmed for quality and cloning vector)
TTTAATAAATATATCAAAATC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.655
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191B01
Clone
Clone name
hba-191b1
LE_HBa0191B01
C05HBa0191B01
P191B01
Clone type
BAC
Contamination
none
Estimated length
75,807
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found