Clone Read LE_HBa0191B01_T7_114089

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191B01_T7_114089
Primer
T7
ID from Seq. Facility
LE_HBa_191_B01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
142 trimmed for vector and quality, 1626 raw
Sequence
>LE_HBa0191B01_T7_114089 (raw untrimmed)
TAGGTCGGGGACCGGGGGTACCTCTAGATGCGACTGGCAGGCTCGCAAGCTTTTCGAGCAGGATATCACACTCTTATAGGGGAGTCATTGGCAAAAAAGT
AGGCAAGTTAGACCTTTGAGGGAGGTGACTT
AGTCAGAATATACCAACATTCAAAATAGATTTGCATCTCAGAAATCTAAAGAAAACAGCCTCTATCTCA
CACAAGGTACGGGTAAGGTTTGCATACATCCTAACCCTCCCAGACCCAACTATGCGGGACTACACCTGGGTTGTTTGTTGTTGTAGACACTCTGCGCTTA
GAAACATGTGATTTCCCATGGGTATCGAAATCTTGATATCGAGAACATGTATGATGAGATCAACAGCGGGCAAATTGAATCAGAATCCCCACAATGTAAC
CAGAGACATGGATGTACTGAATTCTTCATTAACTGACTTATGATGTGTATTCAACAACACGTCTACTTTATAGATACAACTGTGGTTTAAGAGTAAGGTT
TTCTCTCACCAACCCAATTATCTTTGGGTCTGTCGCAACCAACCCATCTACCAGCCCGCACAAAATCACTCTCCCCCACCACACAAAACTCCTGACTTAT
TTACCATTTTCCGTCCCCTTACATATCTCCCTCAATCATCTTTCTCGTCAATTCTCCCACTTCAACTTGTCAATTCTCTTCATAACAATACCGCGTCCAT
TTTAAACTGGTGTGGTATGTTTTCTTCTCAGCTATATACTCTCAACCGTGCCCTTCAACAAATGTTCAATTTTATCTGGTCCTTCCCCCTCCTTCTCTAC
TCACGTTCTCCCGTGTGACACCTGTCCGAGCGTATAACTTATATTTTTCACATGTCTACTCGTGTTCACCCTTCCTGCTTGATTCTCTGTCTATATATCT
GCACCATCTGCTTCTTGCTCTTATCTTACCTCCTATCAACTACTCGCTTCTTACTTCTGTACCCATACAATTACCCATACTTATTCTCGTCGTGCCTTCC
CCTTCTCCCATCCCTAACACTTTTAACCCTCGAATCATTCCTTCTACTTCTCCTAATATGGCATCTGNGTTAAGCGGTACCCCACCTTTTTACCCCCCGT
AATAAAACCCACCCCCCTGGTGTCCCCACACATCCCATTTATGTTTATATTTTGTTTTTTCCAATATNACATTAANNTNAGAAAACACCCCCCTTGCCCC
CAATTTCCTTATTGCCCCCTTCCCCCCCCCCTAAGNTTTACCCTGTCCCGTTTATTGTAAACATTACTTGNANNCNTTNAATCAATTGCACTCCCCCCGT
GCCCCTTTACACACCCCATTTTTTTGTTTATTTTTTTTTTTTACTTTTGCCGTGTCACATTTCCCCCGTTTTCCCGCCCCNTGCCCCTTGCCCTATTTCT
TGGCTTTTTTTTTTGGGGGGTGCCCTTCAAAACCCCTTATTGTCCCTTTCACCCCCCCACTTTATTTTTTTCGCCTCTTACCTTCCAACTTGTTTTTTGT
ACCGTGTAAATTTCCGTTTAACTTTTCTTCCCCCCGGGGCCTTTTTATTACAATACTTTTCTTTTTTCCCTTTTTNNCCCTTTGTCTTTTTTTTTTTTTT
TCTTATTTTTTTTTCACTCCCCCCNN
>LE_HBa0191B01_T7_114089 (trimmed for quality and cloning vector)
AGTCAGAATATACCAACATTCAAAATAGATTTGCATCTCAGAAATCTAAAGAAAACAGCCTCTATCTCACACAAGGTACGGGTAAGGTTTGCATACATCC
TAACCCTCCCAGACCCAACTATGCGGGACTACACCTGGGTTG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.950429
Expected error %
0.9167
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191B01
Clone
Clone name
hba-191b1
LE_HBa0191B01
C05HBa0191B01
P191B01
Clone type
BAC
Contamination
none
Estimated length
75,807
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found