Clone Read LE_HBa0191G19_SP6_114364

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191G19_SP6_114364
Primer
SP6
ID from Seq. Facility
LE_HBa_191_G19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1830 raw
Sequence
>LE_HBa0191G19_SP6_114364 (raw untrimmed)
CATCGATGGTGTATCTGTGGATCTCCCTCACGTCTGTGCGCTATCGTGGCTNTCCGCTGCTGTACACTNGTCAGAATGAATCATCTCACGTGTCTTGTNC
AATCTCTGNACAGTCTGCCTAGCACACTCTACATCANTCTCTCGAGTAAATNATTGTATGTTCACCAGTAGTTATAGCATANAGTNATGCCANCCNTAGT
CGACNCACGCTGCAGCTATACTCTGACCAGATCCAGTATACAGCTAGTCACTTATGTGNGTGATACACATCACGCATCGTGCCAGAATATANCNCCCGAC
ACCCTACAACACTACTGCCNCGTGTGGCCCANGTACATCNACTCCTCTCTCGTNTCATTTCTAACACATAGCGTAGCGNCTGATGAAATNAGCGCTGTAG
ACGTATGAGGCACTCAGTCAGTCACGTGAATACAGACACACATATNCGCGCACAACANTGGTATAGCCTGTCGACGACACATGGGAGAAGAGTGTCTGTA
GAGGTGTGGCACACNCGAGGAAATTGACTGTGATGATTATATATTCTTGCACTNTNTATGCCATCTCTACCTAGATCGTCTGTGTGTACATATATCTACG
GATGACCGTATATTNTNATGAGCAAGTCGAACCTCCTCGCAAGACGTAGCAAAGTACCAGAGACATTCGCTGTATAAGA
CACAGCCAATATAGGTTGAGA
TAGGTCGCTAGCGTTATCANAGAANGTATGACTCCAGCACGACAACGATCCACGTGACTTGGTTATGGACTATATAACTCTCTGCTATTTGCAGTGTCTC
TCTACATGGCAGAGTAGTGATCGATATGCTCATGGACGTGTCGAGTTTNGTAGAATTGTTCTCGCCTATATGNTATATGACGTGATATATCACTACANAG
AGCTGTTCTCGTGTGTACTGAAGACTCTGCGGCGTGTTGCAATGATATGTATGCCATNGCGATAATACTTCTCTGTGGATGATATAGAGGATAATACTAA
TGTTAGCTTCATGTGTANAGTGCTACGACTGTTGACNTNTCTACTTATTTGACATAGTGCATATACTGAGTGCTTCTGCACGGACTGTCTGTCGCTCTCT
ATCGTGCTCTCTGTGCGNCATATATATGTACCGCTATTAGTGCANCATGTGTGATTATTGCTTGATGATGATTTCGCACATGTTTATATCTCGTTTACGA
TACTCTGTACTGTATATCGTGCCTTATACATATGCGTNGNACGAATGACGNGCTGNCTAATTTTGCGTCGCGTTNAGATATTNTATNGTACTGATTACTC
TACATTCGTCTTNCATTCTGTTGNCTCNAGNTATTATGTTCGATNGCTCAATATACTNATGTACTGNATGTCTGTTNTNCTGNACACANCTATATATGTA
CACTACTGCTAGATATNTNGTNAGTGACATNGCTATGCNGNTNACTATTNCTTNCTCTCATTCACACGTGCGCATNATGTCAGTACAGAACTCGATGANC
TTCTCATGTTATNATATACTATACATACATANCTACTGTGACTATGATAACGATATATNTCNTNATACACACACTNGATGACATGTTGTAGTATNCATTG
TCACTAATATGCAACCANTACTGANTAGTGANATAGTATGACACTAATATGTGTATCTGATATGACTAACATACGTCNTGTATATGTTATANANGATATN
CTGTTACTTATTATNCTATACTGCTGGCNTNTACTTCTTGTATAGTTTGACTGTATNTGATGTGTCGTAGATGCATGCCTATTTTATGACTACGTCGCAG
TTCGTTTCATGACTATAGTGTGTTATTNTN
>LE_HBa0191G19_SP6_114364 (trimmed for quality and cloning vector)
CAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.1025
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191G19
Clone
Clone name
hba-191g19
LE_HBa0191G19
P191G19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found