Clone Read LE_HBa0191H06_SP6_114386

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191H06_SP6_114386
Primer
SP6
ID from Seq. Facility
LE_HBa_191_H06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1236 raw
Sequence
>LE_HBa0191H06_SP6_114386 (raw untrimmed)
GTGACTACCTCTCACACGGGTTTTGATAGTGACTTGATTAACTCTTTTGCTCCCTTGGTATCACAAATCATAAGCTCTACGTCAACGGAGAATTATTCAT
ACACTTACATACGGTCATTCTCTTTTTTACAGATATNTCTATGCTACTTACATAGATTTNTATATATTATTGGATCGTATCTCTTTTACTATCTTATGTA
TCTCGTTAAGGTTATACGTCACACTTTCAATAATTGTATGTGAATCTATGCGTAGTAACACAGTATTAGTGAAGAGGAATAATGATATTTATTCTGATTA
ATCGTATTAAGGTATGCATTGAGAGCTTCTTTGCGTTATAGTACATAATCTCACGTATTGCATGAATCATCTTCGCGCTAGCAGTCTTCAAGATGTCTAT
TAGATAGTCACTGAATTCCAAGTATTTGTACTACTGTATTTATTATATTGAACATTATCTATAGTAAGATCATAGATCTGTTTTATATATTACATATTTG
AAGCGACATCAATGAAGTGATTCTTGCTCAATTATACAGAAGATATAATAGCTAATGTGAGCGTATGTTAAAGATCTATATAGTGAAACTTGTATACAGA
GATAAGTATATCGTCGTAGTTCGATACTATCGGATAATA
ATTACATCAGTATGGCACAGCACATCGTTAATGACCATCATAAATTCACCACATTGTCAAC
GCGCTGCCCACTGCTACGGGACACGAATCGTCGTCCATATTTTTCTATACAAAATATTCAATGGATCTCACTTTCTTTACCATATCTTTTAATAATTGTT
TACATAATTTACAAGTCTTCATCCATCCCTTTTCCTTACATTGACTTCTTTCNTAATCAATGGCTCTTATTGGTACTTTTAATGATATTATTCTTTGAAT
GCTTACATATCAGTCAATAACGTGCTTAGACAAACTTGCTCATCTGTAGTACGATCTACGCTTTTGACACTCACTCTCTAGCTCAGTATCCATTAGCTGA
AGTACAATACAACTTCTTTTGCATTACGCGTTACTGTCTGCTCTTACTCACGTGTTAGCTTCTGTTGCACTATGTATATTGTGCTGCTCTTAAATATTCA
CTTCTTCATCTGCTATAGACTATTATTTCTATTCGTGACTCTTAGTAGGTCGTTGCAAATCAATGATAACTTTCAGTCCTGCACTCACACATTTCTTTAC
TGTTAGTATTTATATCCTTAATATATACTCCTATTC
>LE_HBa0191H06_SP6_114386 (trimmed for quality and cloning vector)
ATT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.9282
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191H06
Clone
Clone name
hba-191h6
LE_HBa0191H06
P191H06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found