Clone Read LE_HBa0191P18_SP6_114794

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191P18_SP6_114794
Primer
SP6
ID from Seq. Facility
LE_HBa_191_P18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1305 raw
Sequence
>LE_HBa0191P18_SP6_114794 (raw untrimmed)
ATAACATCTATCCTCAAAGATGACATATTAGAGTATATGATGTTATTTATTGTCCTCAGAACTTAGCTGTCGTGTTCACATCGTCGCGTTGGACAGTGAN
CGTCGGCATTGTCGAGCGGCATACAGTGGCGACCGCCCCTCTCCCCTTTATAGAGAGGGAGTGACGCGAAGGAGTTGNGTCAGCGCACAAACGCATTCCT
GTGTGCGCCCTTTCCTTCTTAGAGAAAGATGAGAACTCGACACGGACGTGGAGGACGCGTGGAGGGTATCGGGGACCACGTCAGGCCGACCGGCAGAAGA
CTGCCCTCAGAGGCGTAATAATGTACATGGCTACTGATTGTCATGAGTATATACAAGTTAGATGAGATCTAGAATCAAGACAAGACGAACGAGACGGGCC
AATAACATACAACTATATATTAATAATATAGTATAATGGTAATACCAGTTGCTTACAGCCTAGAACCAGAGTGCAAACGTGTGTGACGCTATCTATAACC
AGAGCAACTCTGCGAACGTACGCGCGGCTTAAACGTACGATACTATAAATCTCGCTAGAACTGTGAGGAGTGATTTATGCCGTGTGTCGGGCGTGATATG
TGCGGGGATTGCAGGACTCGGCAGAGTGGTGATTCACTACATGTACATAAATAATTGGATGTAAGATTCACAAGCGGAGTGTGACGGAGCGAGTGGCTCG
AGCTTGTATGTAGGATAAGAATGAAGCGTGTTATGTGGGTGCNTGTTATGATGTATGGTTCCTTAAATAAGAAGTGTAATTTCATAGTCGTATCGGCCCA
CCTATTGTATGGGGCGTAGAGATATCGAGATCCAATCACGATCTGAAGATGCAGGGGAGTGCTGCTACGAGTCACCTTCAGGTGTTAATAATCCGCGAAA
GCGTAGTCTGAAGGGTAAGCGACGGGAGCTGCTCCATGGATACCGCGATGACGACGTGCGTCTTGTGTGAGTATTACGGTGAGGGCTTTGTGATCGGTCG
GAGGATGGAGTGGATGGGAGGGACTTGCTAGAGATGCGATCGATGCAAGAGTGGGAGAAATAGAATAACTACGAAAGGCGGAATTCTAGGGTGACAGTGC
ATGTTGAAGTAGTATGTGCGTGAAGGACATGAATATGCGACTATGTGGATTGTCGCTTAATATTCTTCATATCTACTACCTTGTGTAATTGTAACTGAAC
AGCTACTAAGTGTCGAAGAGAGTTATGACACGTTGCGGCAGAATAGATGTACGAAGGATGTTTGCCTAGGTAAGCAAATGATGACATCTAGTAAAAATAG
ATGAA
>LE_HBa0191P18_SP6_114794 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191P18
Clone
Clone name
hba-191p18
LE_HBa0191P18
P191P18
Clone type
BAC
Contamination
none
Estimated length
59,673
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found