Clone Read LE_HBa0004J02_SP6_1202

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0004J02_SP6_1202
Primer
SP6
ID from Seq. Facility
LE_Hba_004_J02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
786 trimmed for vector and quality, 1153 raw
Genbank Accession
Sequence
>LE_HBa0004J02_SP6_1202 (raw untrimmed)
CCGCATGCTGGGGTTTATGTTTCTTGTTAACCATAAAATTAGGCTAACACCCTTAAGACAATATTCTCCAATATGCCCATTAGAGGTNAATATTTGTTAN
NGGGATGCCTATGTATCCCCTATAGGGATTCTTAAAACCTAATAGGCTCTTCACTAGACAAATACATTTTCTGGGAACCTCATTTTAAGAATTATAAAAT
AGATTAAACTCTAGTCTAATTCATGGAATTTCCGGAGTGTTACAGCACCATAAAGACATCCTTTAAGCATACATAACCTACACTTTGTGTAAAAAGGTAA
AGAAGAATGGTGTTAGTACAAGAATGCCCTAAGTATGGAAACCATGCAAAAACATGCATTTAAAAAGGACATTTTGCTTTGAAACCATGCATTATGCCTT
TTTATGAAAGCATTATAAAACTTGATATAATAAGCATTATACGATTTACATACTTAATTTATGCATATTAAATGGTCACAACATCATATAAAATCACACA
TAACATTTAAGTCACATTTTGCATCAGTTTACAGTACGCATTATTCCCTTTATAGTAAGTTTATTTCCCTTTACAGTAAATTCTTTTCCTTCTAAATTCC
TTAACTAACCAAGTAACTCTCTAGTGATACTTGGTGCAATGCATCACTTAAGGCCACAATGTCACATCTGGAAATACCCTCTAGACGTAATTGGCGTCGG
CGTCCTCTATGACGACTAAGACTAGCCTCTTAGCTTACATCATTACATTCATAGGTCGAATTTAGCAGAAAATTTAAAACTTTTTACTACTTCTACGTTG
AGGTTTACATAGAACTTTACATATACATAATAGTTATATATCAAATTACATAGACCTTTCATATAGGAAGATTACCTAGTCTTTAATTTTATTTCACTTA
AATATATATGTAAAACATACATAGTCATAATAGTCTTCTCATCCATTACCATCTAAATAAAAGTAATTAAAATGGGGCCCTACCCAATACATCAATTAAA
TAATGCCCCTAAAGGTTATAACATGGCCAAAAACCCAAATAAAAAGAAAAAAAATTAGGATTCCTAAACCCAAAACCAATATTATAGCTTTGGAAGGGGA
ATCCCCCTTTAAAAGTGGGGGCCATACCTCTTGGGAGAAAAAATTAATCAAAT
>LE_HBa0004J02_SP6_1202 (trimmed for quality and cloning vector)
CTAACACCCTTAAGACAATATTCTCCAATATGCCCATTAGAGGTNAATATTTGTTANNGGGATGCCTATGTATCCCCTATAGGGATTCTTAAAACCTAAT
AGGCTCTTCACTAGACAAATACATTTTCTGGGAACCTCATTTTAAGAATTATAAAATAGATTAAACTCTAGTCTAATTCATGGAATTTCCGGAGTGTTAC
AGCACCATAAAGACATCCTTTAAGCATACATAACCTACACTTTGTGTAAAAAGGTAAAGAAGAATGGTGTTAGTACAAGAATGCCCTAAGTATGGAAACC
ATGCAAAAACATGCATTTAAAAAGGACATTTTGCTTTGAAACCATGCATTATGCCTTTTTATGAAAGCATTATAAAACTTGATATAATAAGCATTATACG
ATTTACATACTTAATTTATGCATATTAAATGGTCACAACATCATATAAAATCACACATAACATTTAAGTCACATTTTGCATCAGTTTACAGTACGCATTA
TTCCCTTTATAGTAAGTTTATTTCCCTTTACAGTAAATTCTTTTCCTTCTAAATTCCTTAACTAACCAAGTAACTCTCTAGTGATACTTGGTGCAATGCA
TCACTTAAGGCCACAATGTCACATCTGGAAATACCCTCTAGACGTAATTGGCGTCGGCGTCCTCTATGACGACTAAGACTAGCCTCTTAGCTTACATCAT
TACATTCATAGGTCGAATTTAGCAGAAAATTTAAAACTTTTTACTACTTCTACGTTGAGGTTTACATAGAACTTTACATATACATA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953715
Expected error %
0.964355
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0004J02
Clone
Clone name
hba-4j2
LE_HBa0004J02
C12HBa0004J02
P004J02
Clone type
BAC
Contamination
none
Estimated length
104,233
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found