Clone Read LE_HBa0011M04_SP6_121242

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0011M04_SP6_121242
Primer
SP6
ID from Seq. Facility
LE_HBa_011_M04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
637 trimmed for vector and quality, 944 raw
Genbank Accession
Sequence
>LE_HBa0011M04_SP6_121242 (raw untrimmed)
AAAAAAAAATTGGTTTCTCCCTCTATGTGACNANANNNNANNNCNGGATNTGAAGTGTATGGATTTCAACTACGCGTCCTCAAGTTAATATACTTCAGCA
ACTGAATTCACAGTCATATATAGAGTTTAAACGGAAGGTTGTGGATAAGAGGCTAGATCCGCCCCTGCTTACTATAGTCATTAGTTGTGTAATGCCTATA
GTTTCATAGAGAATCGTGAACCCACAAGCTTATTCAATTGGATTTAACTTGTGTACACGGACAGGTTAATGTCACATTGGTGATGTAAAAGAAAACTATA
CACCGTTAGTAACTTGGAGTTAACTTTACATTTTAACTAGGCCTAGTTTAGAGTGAGTAGCCACTGGACTGACACCTAGTAAGAGTGAGTTCCTGAGAAA
AGCTAAGGCATCTAATTAAAACTTGAGTGCGTGAGGAAAGACTATAATGGGCTTTTTTTATTAGATTTTTTCATCTTGTGGATATTCTAGTAGTTTCTTG
GAATGGCAAGCTGCAAGCATGAGTTCTTTCAACCCTTACTTGGGAGTCGCTTGGATTTCAGGTTGGTGCTGTGCTGTTGGAAAGTAGTGAATATCCAGAA
CGAATAGGAGAGCCTACATGCCAGGTAACTCTATTTCTCTTCCTGAGATTGTTCGTGTTTGATCAAGTATGTGTGTCCTTCATTTCTGTTTTTTCTTTTC
ATTATGTGGATAGAATATTGATTTAATGTGTGATGAAATGGATAATTTCTGTTTGCAGTATTAATCTAAAAACACCAACTTGTAATTTTGGGGATTATGC
AATTTCCCCCTCCCAAAAACTTAAGTGGATCCTGAGCCAATATTCATACATGTTATGGTTACCCTCTCCTCCGGGATCGTCCTGTTTGCCTCCCTGTATG
TATCCCCTCTTTTTCCACTTATCGTTTTTTTATTTTCTTGAATA
>LE_HBa0011M04_SP6_121242 (trimmed for quality and cloning vector)
AAGTGTATGGATTTCAACTACGCGTCCTCAAGTTAATATACTTCAGCAACTGAATTCACAGTCATATATAGAGTTTAAACGGAAGGTTGTGGATAAGAGG
CTAGATCCGCCCCTGCTTACTATAGTCATTAGTTGTGTAATGCCTATAGTTTCATAGAGAATCGTGAACCCACAAGCTTATTCAATTGGATTTAACTTGT
GTACACGGACAGGTTAATGTCACATTGGTGATGTAAAAGAAAACTATACACCGTTAGTAACTTGGAGTTAACTTTACATTTTAACTAGGCCTAGTTTAGA
GTGAGTAGCCACTGGACTGACACCTAGTAAGAGTGAGTTCCTGAGAAAAGCTAAGGCATCTAATTAAAACTTGAGTGCGTGAGGAAAGACTATAATGGGC
TTTTTTTATTAGATTTTTTCATCTTGTGGATATTCTAGTAGTTTCTTGGAATGGCAAGCTGCAAGCATGAGTTCTTTCAACCCTTACTTGGGAGTCGCTT
GGATTTCAGGTTGGTGCTGTGCTGTTGGAAAGTAGTGAATATCCAGAACGAATAGGAGAGCCTACATGCCAGGTAACTCTATTTCTCTTCCTGAGATTGT
TCGTGTTTGATCAAGTATGTGTGTCCTTCATTTCTGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.961425
Expected error %
0.3437
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0011M04
Clone
Clone name
hba-11m4
LE_HBa0011M04
P011M04
Clone type
BAC
Contamination
none
Estimated length
137,976
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found