Clone Read LE_HBa0045M24_T7_121646

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0045M24_T7_121646
Primer
T7
ID from Seq. Facility
LE_HBa_045_M24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 665 raw
Sequence
>LE_HBa0045M24_T7_121646 (raw untrimmed)
AGCCAATGTGTTTTGCGAGGAATACAGGTTTGGGTTCTCCTTCCCGGGGGGGGCCGCGGGGGGGGGGCCCNNGNGAGAAAGGGAGAGGAGCAGGGAGGAG
AAGCGGTTTCCCCCGACANCCTAAAAATATTATCATCCTATGAGAATAATAGCATGATTAGTCATTAGATTGAGTAGCTAACTGTATTCACTCTCTCAAC
TTCTATGTCTATCGTTCAGGTTAATTTCAGTGAGTCTTCTCTATTTACTTCCAGTTTTTTCATTTATTCTTTTTTCTCTCGATTATAACGTTTTATATTA
TCTTTTTCTTTTTATTTCTTTTTCTATTTTCTTTTATTTCTCTTTTTTCCGTTTTTCGGTTTGTCGCTCTGTTTGTTTTTTTTTTTATTTCATGTATGTT
TTCCCCCCGCATTACTAATTTATTTATTTCATTTTTATTCTAGTTAATTTTCCTCCCCCCCCCTATGATTGTTATCTGTTGTGCGTACAGTGTTCTTATC
ATTAAGTTAGTTATATTGTGTGTTCTGAATGGTGTGGCTGTAAGCTTAGACATTTTGTTGCCCGTGTGTTTTTATTTGTTGTGCCTGTCACTCCATTTTT
GTTTTCTCTTTTCTCCTAGTTTTATCCTTCTCTTTATTTTTTTTT
TTTCTCTTTTATTTTTTTAT
>LE_HBa0045M24_T7_121646 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.7506
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0045M24
Clone
Clone name
hba-45m24
LE_HBa0045M24
P045M24
Clone type
BAC
Contamination
none
Estimated length
63,533
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found