Clone Read LE_HBa0151K04_SP6_123114

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0151K04_SP6_123114
Primer
SP6
ID from Seq. Facility
LE_HBa_151_K04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1845 raw
Sequence
>LE_HBa0151K04_SP6_123114 (raw untrimmed)
TCCCTGCGAGGTATTTATTGAGGGAGAAAANTGTTATGACTTGTGGTTATAGTAGGATGCACACGGACAGTACTTGTGCTGCAGTTGTTGCACGTGTNAT
GGNGACNTGTTGNGACGTATCATCGTCCATCTCACNGNCACNACCCCNTNTGCTACTGGTACANATCATACTAGTGATAGTANAGTAAGGATAGTGTGAT
CANTNAGTTCATTATTGTATTANANTCACTATTGCTAATATAACCGACATAGAGCATAGTAGCTAGGCCTATTAGACTATAGATCACTCTGACGTGTCAG
ACTACTAGGAATCTTGATAATAGTGTTATTTACGATAGCTATAGATAGGAG
TATGAGCAGATTCAATGTCGAGTTGGAAGTTGAACAGTTGTGAGTGTCG
CAGAATGCTCCCANTACATTCTTATGGTCGCTACACAGTACACGTTAAATACATACGTCTATGGNTGTCTAAGTAATACTAGNAGGTGTACCACCTANGC
GTTNAGTNCNATATAGGAAACTGTCNCACATGCGACTNGNTATGCGTGTATACATNATACAAAGAGAGAGAAATGTTGAATGTGAAGTCGTCTCTGTTGG
AGATCATACGAGAGAGAGAATGCAGCTGTATTGGATTCTTATAGTATCGTATTAGCGCAGATAGGGAAGAATGATTATGGCTGGGTAGTGGAGTCTATAT
TATGTGATGGAGCATCTGTGCACTGTACCTCTTAGATAAGCATGCAGAATTCTAATNGATCAGATGAATATGTATATCGATTAATATCATACCTGTGGTA
CTGAGTTTACGACATTGTGCAGAGATCTTGAGTGGTGTGTACTGTACTTAGAGGTACTGGTTNAGTACNGAGTTGNGATGTCTTGCANGTAAGTACACAG
TGTCTTAGTGTCGTGNTTGCAGATCATGTGGGACTAAATGTATATGTAGCACTGTGTCCACTCTGCTCCACGCACTCTCGTTCACTCTATCTACTACATC
TTCGAAGCACTCTAACATATGGCCACGGAAATACGACGTAATCAGTCTATTNGGTGGAAGCAATCNACGATCACGTGTGCCTTANAGTGCATACATACTG
TGTCCTCCACTGCATCTACTCTTCACAAGTATGTCGTCACCACACATAGTGCTCCTCATCTCTCTACACATNGATCACCTGCGACTCCCCGCAATATTCT
GCTTCGGCACGACGCATTCACTNCTGTGCAGNACGCATCTTATCCTTGCCTACTGTATTGTAATGTCCGTATTCTATCTATACCTGGCGTATGTGTCTAT
ACTCATCTGTGTTCTATAGCTGTACGTACTCTTAGTTNGATTACTAGTGCNGCATGGTGTTTGACTATGCTGTGTTATCGCATCTCATTTGTTGCAATTA
TTGTGTCGCTAGATCANCTTGTATATCGGTTACGTATGCTACGTTGCTCTGTCTCTCTTCGTCGTATGTTCTCCTCAGACTCGTTTGTATACATCTGTCC
ATTACATCTTCTCTGTCTTCNCTATTCTGTCTGTNCAGCTCTACTTTTTTCTATGTNGTGNGTTGATCGCCTATTGTATACATTCTNCTTAATATAGTTG
TGTATATGATTTATTCTAGNTCTNTCCTATGTACTGTCTATTTTATTATGTCGCTTACTCATATCTTATACTNATGGATCNCTCTCTATACTCGTCTGAT
ATACACTACTATGCGTTGNAGTACTCNATCGTATTGAAGTGTATTGCCTNAANTAGATCAGCGGATGGTGATAAGTATGTAGTCTGAGATATGGAAGTGT
TGAGTCTATAATGGTCTACTACATATACTACCGATTTACTGTTCT
>LE_HBa0151K04_SP6_123114 (trimmed for quality and cloning vector)
TATG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.1676
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0151K04
Clone
Clone name
hba-151k4
LE_HBa0151K04
P151K04
Clone type
BAC
Contamination
none
Estimated length
81,768
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found