Clone Read LE_HBa0175O24_T7_124382

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0175O24_T7_124382
Primer
T7
ID from Seq. Facility
LE_HBa_175_O24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 1055 raw
Sequence
>LE_HBa0175O24_T7_124382 (raw untrimmed)
AACCCAGCGCCCTCAATTTCCCCGCACCGAGAGGAGATACTCGAGAAGCTCGCCACTGCACATGGCGAAAAGTGGACTCGCACGCGCAGGGATCCTGTTT
AAGGATTGTGATCGATCCTGACGCACAGTCAGGATCTCCCGTCACTACCCCTTTAGTCCCTTGCCTGGATGCAAGGATTCCCCCTAGTACTCAGCCCTTG
TGCCCTTGCTAGGAGATCCAGCAGTCCCTATCACCTTGAGAAGTACTTACCGCCTTTTCCTCCTTTAACCCCCCTCTGGGTGTATCTCTTTGTGGTTTCC
TGTTCTTTTAACTGGTTTGCCTTCTGCGGGAATTAAGGCCCCAAGGAACCTCCTGACTATGTCTCAGGNCAACGTGACTCCCACACACCCCCAAGGCAAC
GTACTTACTTTGTGTCTCCTAGTCCCCCCAGCTGGCTAGTCGCCAACCTCGACAACGCTCACTCCTGCGAGTTTTCCTAGTCCAGAATAACTCTGGTGGG
AAAAAACTCAGCCTATCCTTAATTTTGTGTGCATTCCATATCTTTCAATACCCGTTTAAAAAATCGAAATCCAAATTATCCAAAATTCAAGGATT
TAAAA
AAAGTTGCACTCCAAGTCTGACAGTTGGCTTTGAAATGTTCACAGAGCCGAAGAAAAATAACCACCCCCCCTGTAATGTATAAGTACGCCCAAACGTGTA
GCCCCCTCGACGTAAACCACAGCCACCCCCATACCTTGGCCCTCAGAAGTAAAGGAACATTACAATGGCCACAACCAGTTTTTTGTTTTTAATTAAAAAC
CCATTTCATCCTTTGTAAAAACAGAATGCCTTTTGGTTTTTTTTTATTATTATACAAGAATCGTATTTATTTTTTATTTTAAGAAAAATATTGGGAAAAG
ATTAATGGAAATAATAAATAAGGGTTTTATAAGAAAGTTGGGAATAATTTTAGTTTTGAATAGAATATTGTGGTAAAATAGAATTNTTAATTTAAATNTA
AAAAAAATAAGTTTTNATAGATATTTTTTTTTTTAAATAATAAGGAAAAATTTTT
>LE_HBa0175O24_T7_124382 (trimmed for quality and cloning vector)
TAAAAAAAG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.3732
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0175O24
Clone
Clone name
hba-175o24
LE_HBa0175O24
P175O24
Clone type
BAC
Contamination
none
Estimated length
98,880
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found