Clone Read LE_HBa0176E17_SP6_124519

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0176E17_SP6_124519
Primer
SP6
ID from Seq. Facility
LE_HBa_176_E17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
529 trimmed for vector and quality, 1005 raw
Sequence
>LE_HBa0176E17_SP6_124519 (raw untrimmed)
AATACTTAACTTTGACAATGCGTCTAGCAGGACTAACTCGGGCGTAAATAAACATATATCGCCGGTATGTAATTCTCCCTTTACTACTACCCAAGACAAA
AGTTAAGAAGAGTCAACTTCTTAGACAGGTGAATAACTGACACTGCTGCAAATAAAAGAAATGATTAAGGGCTTATAACCTTTTTGGGATAATTATTCTC
GAAAAATACTTGTACCTTAATCAAGCACAAAAATTGGCTCATTAAGTGAGGATTGTCAACAACCTTATATACTTGACTAGTATTGGACTCTAAGACCTGA
ACGCAAGCACTATATGCCATGGTTGAACTTCTGGAACACAGGAGCAACATATATAAGGTCCCAATAGTAGAAAACCAAGAATAAGATGGGTCTAGTTTTC
ATATCATGTTAAATAAGCGGACCTTACGCCTAACTCAACCCAAGAGGCGAGGATTGTCCAACACTGTATAATGAGACAGCAACCTAAATATTTGATTAAT
GTGGGTACAATCAAGGGTTTATAACAATAAAAAGGTAAATCATCAGAAAATGATGTATAGTTGGAAAAAAGAACCTCCCAGATGGTGAATCAAAAGCATA
AAAAAATAGCTCCCTTGATTTCCTCTTTGTAATGAAAAAGTGATGGACCTTCCTAACTAATTGCAATACATAAAACTTTCCCATTCAATTCCATTTCACA
TTCCTAGACCGGGAAATACCCTTTGCCTTCCCCCTACAATTCGAAAAATTAGAAACCATTCCCGACCCTGAATCCCATCCCAAGCACTATTCTAATACCC
ATAGTTAAACAAGGACACCCTGCCCCGCCACAAACTTTAAAACCCCCCTCCCCCCCAACCCCCTACCGGCCCTCCGTTAAGGCATAAGATCCACTCTCAC
CAGGCCGTCTATCATGAAAAACGCCCCCCGCGCTCTCACGGAACCGCGTCCTCCTAACATCCAGCCTCTACTGGCTCCAAGTAAATTCTGCGCTAACTTT
CTCAT
>LE_HBa0176E17_SP6_124519 (trimmed for quality and cloning vector)
GGCGTAAATAAACATATATCGCCGGTATGTAATTCTCCCTTTACTACTACCCAAGACAAAAGTTAAGAAGAGTCAACTTCTTAGACAGGTGAATAACTGA
CACTGCTGCAAATAAAAGAAATGATTAAGGGCTTATAACCTTTTTGGGATAATTATTCTCGAAAAATACTTGTACCTTAATCAAGCACAAAAATTGGCTC
ATTAAGTGAGGATTGTCAACAACCTTATATACTTGACTAGTATTGGACTCTAAGACCTGAACGCAAGCACTATATGCCATGGTTGAACTTCTGGAACACA
GGAGCAACATATATAAGGTCCCAATAGTAGAAAACCAAGAATAAGATGGGTCTAGTTTTCATATCATGTTAAATAAGCGGACCTTACGCCTAACTCAACC
CAAGAGGCGAGGATTGTCCAACACTGTATAATGAGACAGCAACCTAAATATTTGATTAATGTGGGTACAATCAAGGGTTTATAACAATAAAAAGGTAAAT
CATCAGAAAATGATGTATAGTTGGAAAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953443
Expected error %
0.5279
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0176E17
Clone
Clone name
hba-176e17
LE_HBa0176E17
P176E17
Clone type
BAC
Contamination
none
Estimated length
32,562
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found