Clone Read LE_HBa0176J18_SP6_124640

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0176J18_SP6_124640
Primer
SP6
ID from Seq. Facility
LE_HBa_176_J18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
435 trimmed for vector and quality, 466 raw
Sequence
>LE_HBa0176J18_SP6_124640 (raw untrimmed)
CGGGGGCATATATTATTAGATATGCATACCAATTATATTATTTATTTTGAGATAAAGAAGATATCAAATTTTATTGACCTTTCATGTGCATTCAAAGCAT
GAAGCTAATCATACTTTATCCATTTCCTTTTATTTTTTCAATTTTGTAAATTAAATATGAATTTAGTATGTCATGATTATTTCTATCAAAATTAGAATAT
TGTCCTGACAAACAAAATGTGAGATTACTATTTTTGAATTAACATTATAATCATAAATTTTATAACATCTTGAAAGAGTAGAGAATAGTAACAAAATTTG
CATATGTTAATAATGATAATGTGTTCATCAAACTTGAACTTAAATCTCAAATATTGTCATTTGTTCATCTTATTTTTTACCGTAAACAATAAAAGTGATT
CACATAAAAAATGAAGAATAAAAAGAATGAAAAAATCACCAACAATAATGAAGAAAATAACACAGA
>LE_HBa0176J18_SP6_124640 (trimmed for quality and cloning vector)
ATTATATTATTTATTTTGAGATAAAGAAGATATCAAATTTTATTGACCTTTCATGTGCATTCAAAGCATGAAGCTAATCATACTTTATCCATTTCCTTTT
ATTTTTTCAATTTTGTAAATTAAATATGAATTTAGTATGTCATGATTATTTCTATCAAAATTAGAATATTGTCCTGACAAACAAAATGTGAGATTACTAT
TTTTGAATTAACATTATAATCATAAATTTTATAACATCTTGAAAGAGTAGAGAATAGTAACAAAATTTGCATATGTTAATAATGATAATGTGTTCATCAA
ACTTGAACTTAAATCTCAAATATTGTCATTTGTTCATCTTATTTTTTACCGTAAACAATAAAAGTGATTCACATAAAAAATGAAGAATAAAAAGAATGAA
AAAATCACCAACAATAATGAAGAAAATAACACAGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.856957
Expected error %
0.3358
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0176J18
Clone
Clone name
hba-176j18
LE_HBa0176J18
P176J18
Clone type
BAC
Contamination
none
Estimated length
117,741
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found