Clone Read LE_HBa0176J20_SP6_124642

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0176J20_SP6_124642
Primer
SP6
ID from Seq. Facility
LE_HBa_176_J20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
433 trimmed for vector and quality, 465 raw
Sequence
>LE_HBa0176J20_SP6_124642 (raw untrimmed)
GGGGGGAGCCTTTTTTCAGTGAAGTTATTGTAATGGAACTCCATAAAGCTATCGGACTCGTTCTTCCTTGAGTGGTTGCCTTCAGGCTGTTTTACCGAAC
CATGCAAATGAGCAAATCTCATTTCTGGATAAGAAAAGTTTGCTCAACTTTCACGAAACTAAATTGAGGGGCTGAATGTAAGGTCCATATTTGAGTGAAC
CATATTGGTGTAGGCTGATGAAGGAACAACTTGGTCTGTGCTAATTTTCAAAATTGTTTCTTCAGACTCGGTTCTTATTCATTTTTGGTTGTTTTCTCCC
TTTTTCCCGTCTCTGTCAGTAAGGAACTGAATAAGAAGTACACAAACATAGAAATAAGGCAAAGCTTAGAAATGTCCAGTGCCAGTATTAAGGCGACGGA
ATGAATTGGCCTATGCAATCTTTTACCAAGTTTCTGCCTATAAGTCAGTCGTCAAGCTTAGAAAC
>LE_HBa0176J20_SP6_124642 (trimmed for quality and cloning vector)
ATGGAACTCCATAAAGCTATCGGACTCGTTCTTCCTTGAGTGGTTGCCTTCAGGCTGTTTTACCGAACCATGCAAATGAGCAAATCTCATTTCTGGATAA
GAAAAGTTTGCTCAACTTTCACGAAACTAAATTGAGGGGCTGAATGTAAGGTCCATATTTGAGTGAACCATATTGGTGTAGGCTGATGAAGGAACAACTT
GGTCTGTGCTAATTTTCAAAATTGTTTCTTCAGACTCGGTTCTTATTCATTTTTGGTTGTTTTCTCCCTTTTTCCCGTCTCTGTCAGTAAGGAACTGAAT
AAGAAGTACACAAACATAGAAATAAGGCAAAGCTTAGAAATGTCCAGTGCCAGTATTAAGGCGACGGAATGAATTGGCCTATGCAATCTTTTACCAAGTT
TCTGCCTATAAGTCAGTCGTCAAGCTTAGAAAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.967178
Expected error %
0.1883
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0176J20
Clone
Clone name
hba-176j20
LE_HBa0176J20
P176J20
Clone type
BAC
Contamination
none
Estimated length
130,292
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found