Clone Read LE_HBa0178C10_SP6_124848

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0178C10_SP6_124848
Primer
SP6
ID from Seq. Facility
LE_HBa_178_C10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
575 trimmed for vector and quality, 903 raw
Sequence
>LE_HBa0178C10_SP6_124848 (raw untrimmed)
TTGGAGGGTCTTGATATTTTTGGCCCTGATCTTTAGCATTCCAGCTCTTTATGTTTGTTCCACTTTCAAATGCTTCTACCAGCTTACAAGAGTAGGCGTA
TCCGTTTTATTTGCTGTCACTTCATGTGAATTTTCTGCATACTTCTCCAGAAAGTGGCATCTTCGACTTACAATGCAGACTAACACATATATTTCTTTTG
CTGTTTAGCAGCTCATAAAAAAAATTGTTTCCCCACAGACTCTTCTTATTTCTTCATCAGTAGGATGGACTATATTGTAGGAGAAATCCTGATGTATGAG
TATTCTATGTTCTTTTGGCTTGGTGAAGGGCCTGATGGAAGGCATAACAAGTCTTAAATCTATAGTAAGACCAATAAATTATCTGATACTCATTTCTTTG
TATCCAGTTATGGTCAAAATGTAATTCCTCATCCAAATTTGTAGTTTTATGTTATACCTTTTAATATCCCATTTCTAGTCCAATGAACTAAATATCTACC
AATAAATTTGTAGTTTTATGTTATACCTTTTAATATCCCATTTCTAGTCCACTAAATAATCCCGTCATTGTTTGATCCCTGTACTTTAATCCCCATATAA
TAATTATCCTAGTATAACTTGTTCACAGAAATGAACCTTTACTCTTTGTGTTCTTTATAGTTTATACCCCATACCTAAAGCAACTGCAAGGGATAGGAAC
AGTTTTGAATTTGGGGGCAGCAATTTAGTGGTTCCTCTTGGTGTTTACGTCCCTTAAACTAAGAGGCTCCCCCACCTTTGGTGGTTAGTTTTTGGAGCAA
AATTTAAATATTTGATTTTTTGTGAAACCCGGGAAACCTGATATATATTTCTTTGTCATGTTTGGGGAAACCCGGATATACCCTCTCTTTATATGCAAAA
AAC
>LE_HBa0178C10_SP6_124848 (trimmed for quality and cloning vector)
ATTTTTGGCCCTGATCTTTAGCATTCCAGCTCTTTATGTTTGTTCCACTTTCAAATGCTTCTACCAGCTTACAAGAGTAGGCGTATCCGTTTTATTTGCT
GTCACTTCATGTGAATTTTCTGCATACTTCTCCAGAAAGTGGCATCTTCGACTTACAATGCAGACTAACACATATATTTCTTTTGCTGTTTAGCAGCTCA
TAAAAAAAATTGTTTCCCCACAGACTCTTCTTATTTCTTCATCAGTAGGATGGACTATATTGTAGGAGAAATCCTGATGTATGAGTATTCTATGTTCTTT
TGGCTTGGTGAAGGGCCTGATGGAAGGCATAACAAGTCTTAAATCTATAGTAAGACCAATAAATTATCTGATACTCATTTCTTTGTATCCAGTTATGGTC
AAAATGTAATTCCTCATCCAAATTTGTAGTTTTATGTTATACCTTTTAATATCCCATTTCTAGTCCAATGAACTAAATATCTACCAATAAATTTGTAGTT
TTATGTTATACCTTTTAATATCCCATTTCTAGTCCACTAAATAATCCCGTCATTGTTTGATCCCTGTACTTTAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.937993
Expected error %
0.3204
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0178C10
Clone
Clone name
hba-178c10
LE_HBa0178C10
C08HBa0178C10
P178C10
Clone type
BAC
Contamination
none
Estimated length
73,272
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found