Clone Read LE_HBa0179E24_SP6_125294

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0179E24_SP6_125294
Primer
SP6
ID from Seq. Facility
LE_HBa_179_E24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
566 trimmed for vector and quality, 982 raw
Genbank Accession
Sequence
>LE_HBa0179E24_SP6_125294 (raw untrimmed)
GAGGAGTTCGGCTTAGGCTTAATGGTGGACAAGAATTAATAACCATGAAAACAAACGAGGAAGGGNNANNNNGANNCGNANAAACCTTGACAAGTTAATG
GTTTTTAACAAATATTAAATAAAATCTTGAAATTATTAAAAGGATATTCAAAAAATTTGCTTACATATATTTAAGAAGTTATTATTGTAAAAAATGTTAG
TTTTCTGAATATAATTATTATTATAATATTAATTTAAAGTTTATTATTATTACAATATGAGTTAAAGATTGATATAGAAATATATAAACTTCAAAAATTA
AATCCGTCTTTGATGCTAAAATGAACTTTCACAATCACTCTTATCATAATCATCAATGTCTGCCACTACACAATTACTATAAAAGTTGTCAACCACCACC
GTCCACCACCATATATCTATAAATCACCGTCAACCACCACCGTCCACCACCATATATCTATAAATCACCATCGATCATCACAAATTATCAACCATTACTA
TCACTAGATATATATACAATCAGAATCACCATCAATCACTATCACTTTCAACCATCATCACCAATCACTATTCGCTTCCAACTGACATTACTAATCACTA
CTACATCTAATCATTTTTACGATTAGAATTATATCACTATTGTCATTCATTATCACAAACAACTATGTCAAGCAAGACCACCACTATCAACTACCATCAT
CGAACATTCACCAACACTACATTCATATACCAACAACCACCTCTACCATCTTAACTAATACAAATACCATCAGCCACTTTTTGAATTTGGAAAAATTTAA
AATAAAATACGTCAAAAAATTGATCAATACCTTCAATCTTGGATCTTAAACATGTCCGGGGCAAAAAAAATTTAAAGTTTGTATTTAGGATGGGACCCCC
TTTTTTTAAAAAAAAAATCTAAAAATATAATTTTAAAAAAAAAATAATTAAAAATAAAATTTAGGAAAATTTCCCGGGAAAA
>LE_HBa0179E24_SP6_125294 (trimmed for quality and cloning vector)
TTAATGGTTTTTAACAAATATTAAATAAAATCTTGAAATTATTAAAAGGATATTCAAAAAATTTGCTTACATATATTTAAGAAGTTATTATTGTAAAAAA
TGTTAGTTTTCTGAATATAATTATTATTATAATATTAATTTAAAGTTTATTATTATTACAATATGAGTTAAAGATTGATATAGAAATATATAAACTTCAA
AAATTAAATCCGTCTTTGATGCTAAAATGAACTTTCACAATCACTCTTATCATAATCATCAATGTCTGCCACTACACAATTACTATAAAAGTTGTCAACC
ACCACCGTCCACCACCATATATCTATAAATCACCGTCAACCACCACCGTCCACCACCATATATCTATAAATCACCATCGATCATCACAAATTATCAACCA
TTACTATCACTAGATATATATACAATCAGAATCACCATCAATCACTATCACTTTCAACCATCATCACCAATCACTATTCGCTTCCAACTGACATTACTAA
TCACTACTACATCTAATCATTTTTACGATTAGAATTATATCACTATTGTCATTCATTATCACAAAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.877806
Expected error %
0.1223
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0179E24
Clone
Clone name
hba-179e24
LE_HBa0179E24
C05HBa0179E24
P179E24
Clone type
BAC
Contamination
none
Estimated length
82,845
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found