Clone Read LE_HBa0179G02_SP6_125320

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0179G02_SP6_125320
Primer
SP6
ID from Seq. Facility
LE_HBa_179_G02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
764 trimmed for vector and quality, 1004 raw
Genbank Accession
Sequence
>LE_HBa0179G02_SP6_125320 (raw untrimmed)
TTCCGAGCTATTTTCTCAGGTCGGTTCTTTATACTTCTTGACCCTTTTTTCTGATGAAGTTTAGTACTTCTAATTTACATTCAATGGTCTATGAGTCATC
GTCATATGGTTCTTATCAGAGTTCAATCAGGATTTCTATGATAAATTCTTGATTTGCACGATGGATGCCAAACCCAGATGCTAGAAAAAAAATGAGCCAT
AATAGGTATATTGCTTCTTTTCCTAGTCTTCTCAACTACCTCACTGATTACTAGGATTTAGCACCTGAAAGAGAAAACCCTGTTCTACTTAATCAATAAT
TTGTTTGGAAACAACAGTTAACTTGTTGCATAAAAGTTGGCCATTTGAAGAATATTTCTGCATTGCCACAAGCTTTAAAAAACATAAAAACAAATTGACA
TAATACAGTCCAGCATCATGCTGTATTAAAAAACCTCATTAGAACTTTAAGGTCTAAATAAAGAGCAGGATAAGATCTACTAGGGGCAAAACTTAGAACA
CAAAAGCCTGGTCATATTAACTTCTCTCCATATGTGCATTGCCTATGTAATCATTTGAATGTAGCACACAGCATAAGAGGACAAAAGAACATGAAATAAA
TAGAACAGGGAGTAAGGACGGTAACAATGAAGGAAATTAGACCAAATCTCCCTGCACAGCCAAATTGTCAAACTATGATGAAAGGCAATAAATATAATAG
TAAATCAGTCCCAAAAGTGGCAAATAGGAATACAGCAGTAACAGATATACTTGAAATGGCACCTAAATTTTCATAAACACAAATTATGCCAGTTTTCATG
CATTTCATTTCTTTTAGATTTGGAAATGACGGAAGTGTTTACCCCCAAGCATTAAAAGCTATAAGATAGTACATCATCAAAAAGGGGTCATAAGGAGTGA
TAACCAAAGCTCAAACTTAGAACATTTATTATTACTTTTAAACTTAAAGCTTAAACAGGTCAGGAAAAAATTCTTTTTTCATTTAATTCTCTTCAAATAA
AATT
>LE_HBa0179G02_SP6_125320 (trimmed for quality and cloning vector)
TTCTTTATACTTCTTGACCCTTTTTTCTGATGAAGTTTAGTACTTCTAATTTACATTCAATGGTCTATGAGTCATCGTCATATGGTTCTTATCAGAGTTC
AATCAGGATTTCTATGATAAATTCTTGATTTGCACGATGGATGCCAAACCCAGATGCTAGAAAAAAAATGAGCCATAATAGGTATATTGCTTCTTTTCCT
AGTCTTCTCAACTACCTCACTGATTACTAGGATTTAGCACCTGAAAGAGAAAACCCTGTTCTACTTAATCAATAATTTGTTTGGAAACAACAGTTAACTT
GTTGCATAAAAGTTGGCCATTTGAAGAATATTTCTGCATTGCCACAAGCTTTAAAAAACATAAAAACAAATTGACATAATACAGTCCAGCATCATGCTGT
ATTAAAAAACCTCATTAGAACTTTAAGGTCTAAATAAAGAGCAGGATAAGATCTACTAGGGGCAAAACTTAGAACACAAAAGCCTGGTCATATTAACTTC
TCTCCATATGTGCATTGCCTATGTAATCATTTGAATGTAGCACACAGCATAAGAGGACAAAAGAACATGAAATAAATAGAACAGGGAGTAAGGACGGTAA
CAATGAAGGAAATTAGACCAAATCTCCCTGCACAGCCAAATTGTCAAACTATGATGAAAGGCAATAAATATAATAGTAAATCAGTCCCAAAAGTGGCAAA
TAGGAATACAGCAGTAACAGATATACTTGAAATGGCACCTAAATTTTCATAAACACAAATTATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.945265
Expected error %
0.2382
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0179G02
Clone
Clone name
hba-179g2
LE_HBa0179G02
P179G02
Clone type
BAC
Contamination
none
Estimated length
75,750
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found