Clone Read LE_HBa0183B02_T7_125584

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0183B02_T7_125584
Primer
T7
ID from Seq. Facility
LE_HBa_183_B02-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1201 raw
Sequence
>LE_HBa0183B02_T7_125584 (raw untrimmed)
CCGCTGCGAGACAACCAGGCCATAGTCCTGCGCCGAGAATGAGAGACACGAGAGCAAGATGATCCTTCGTTCGAGCGCGTGCGGGCCAAGGACAGAGACA
AGACATGCATGTACCCCTCTCCCCACAGAGCAGACCCCTTTTTTTGGAAGACGACATAAACGACGAGGCGAAGAACACCACCCATGAAGGGGAGGTCTTC
TTTCCAGAGAAACGGAGGCACCACGCAACCAGCGGCGCCAAACGACTGCCGCGTTCGGACAGGAGAAGGCATGAAAAGTGGAACATCAAACCACAACCAA
GTTGACGAACGCCGGCCACAGAAGAAAAAACTTAGGGTGCCAGTACCACGCTACCACAGCCAGTATTCCTGAGGAAGCTGGTGGACGATAGAGTGGGACA
CTGATGATGAGCGCGGCGCGAAGACAGCGTGACCCGGTCGATTAGAACCGGTATAGACGTATGCGAGAGGAGCGGGGCTGCGCAACGGAGAGCTCATGCG
CAAGAGCGATAGAGGACGNATGGAACGCAGGGAGAGTGAGAGGGAGGTGGCGACAGCGTGGCATCGAGCCCGAAGGAGCGGAACACGGATCAGACGCTGC
TTAGG
AAGCCAGCATCGCCGCTGCACCCCGTCCAGCGCATAGCCGCAGCGACGCACTGACAGCGGGTCGAGAGCAGCGCAGCAGCCACAGACCGGCTCAT
GACGGCCGACGTTGGATCCCTACGCCACCCGCCTTCCGACAACTACACCAACAACAATGCATGACTGACCCCCACACAAAACAACAGACGCCACCAACGA
GTGCCGCGTCACGAGGCACGGCGCGTGGACGAGCAGCCCTAGCCGTCGCCGCTGCGGGGCATCGCATATCAGCTGCGTGCAGTGCGCCCGGCCTCGCCCA
ACTGTCGCACACAGCACGGCCTGTGGAGCTCTTCAAAAATCGACGTGCCTCAGCCGAGCAGCACCCGCAACGACAACAGCCGCGGAGACACTCCCCGCAG
GACCAGTACGCACCACCATCAGGACGGCCACCGGAGACTGCACGAGACTCCAGGAGAACCTGAAGTGGACAAGCGATGTATAGCGCAGGCCTCGCGCGAC
GAACCCCAAGCGTAGTAATAGAGAGCATGGCGACGACTCCGGTGGCAGAAAGAACAGGAGAGAGCAGGCTTGACGCCAGGGAGCAGAATGGATGGCGGAT
A
>LE_HBa0183B02_T7_125584 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.3129
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0183B02
Clone
Clone name
hba-183b2
LE_HBa0183B02
C12HBa0183B02
P183B02
Clone type
BAC
Contamination
none
Estimated length
113,196
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found