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Clone Read LE_HBa0054O03_T7_12581

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0054O03_T7_12581
Primer
T7
ID from Seq. Facility
LE_HBa_054_O03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
650 trimmed for vector and quality, 738 raw
Sequence
>LE_HBa0054O03_T7_12581 (raw untrimmed)
CCTGGGACCGAGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTATTTTTAATCGTGATATTTACCATCAAGGAAANNGCCAGNAGAANGAAAGGA
ACNANGNGCCCTTTAGAGGGNAAACNAAGNANANAAAGANNNNGNACAACNNCNGCAAAAAAGAGANNAACNAAGAAAGAGGNAAGGCCCACCNANAACA
CANACAGAAGGAGGAAGNNACAACCAAACCCNAAAGAGAAGACACNACNAAANCNGAAGCNNNANCNCGCCCCCACAAANNGGNGGGGNCAACAACACCC
AACNNGGAAAANNANNGGGCAAAAGAAGCNNNGGGAAGNGGNNNNGNNAGNAAGNCAGCCACNNAANNAGCNGAGNGAAGGGGGNAAACNNCAANANNCN
NGNCCNNAACNNGNNCACGAACGAAGNGAAAGNCAANGGAGNCANGNNNCANCCNACNACGAAANACCGGAANGGAACAAANGCAAGCGGGGCNGAAGNN
ACCANAGAAANCCCGNGGAACNCCANNAAGNGAAAGCCGANGNNCNNGAAGAACACNNNNGAACAAGNNAAGGGNNACAACANCAGNNGCCACANCNCCA
NACACAGCNNCNGNAGAGGACAAAGACACAGAGCGGNANCCCAGAGAGGCCGAGGAAANCGGCGCACNGCCCAAGAAAACGAAANGGCCAGAAGNAGAAG
GGCGACCACNGGGACCACCAGCCANACGCCGAAAAAAC
>LE_HBa0054O03_T7_12581 (trimmed for quality and cloning vector)
AGCTTATTTTTAATCGTGATATTTACCATCAAGGAAANNGCCAGNAGAANGAAAGGAACNANGNGCCCTTTAGAGGGNAAACNAAGNANANAAAGANNNN
GNACAACNNCNGCAAAAAAGAGANNAACNAAGAAAGAGGNAAGGCCCACCNANAACACANACAGAAGGAGGAAGNNACAACCAAACCCNAAAGAGAAGAC
ACNACNAAANCNGAAGCNNNANCNCGCCCCCACAAANNGGNGGGGNCAACAACACCCAACNNGGAAAANNANNGGGCAAAAGAAGCNNNGGGAAGNGGNN
NNGNNAGNAAGNCAGCCACNNAANNAGCNGAGNGAAGGGGGNAAACNNCAANANNCNNGNCCNNAACNNGNNCACGAACGAAGNGAAAGNCAANGGAGNC
ANGNNNCANCCNACNACGAAANACCGGAANGGAACAAANGCAAGCGGGGCNGAAGNNACCANAGAAANCCCGNGGAACNCCANNAAGNGAAAGCCGANGN
NCNNGAAGAACACNNNNGAACAAGNNAAGGGNNACAACANCAGNNGCCACANCNCCANACACAGCNNCNGNAGAGGACAAAGACACAGAGCGGNANCCCA
GAGAGGCCGAGGAAANCGGCGCACNGCCCAAGAAAACGAAANGGCCAGAA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
1.01125
Expected error %
35.478
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0054O03
Clone
Clone name
hba-54o3
LE_HBa0054O03
P054O03
Clone type
BAC
Contamination
none
Estimated length
99,829
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found