Clone Read LE_HBa0184L22_SP6_126228

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184L22_SP6_126228
Primer
SP6
ID from Seq. Facility
LE_HBa_184_L22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1303 raw
Sequence
>LE_HBa0184L22_SP6_126228 (raw untrimmed)
CTTTCGATACTGTATACGGTTGTGTTTCGGCGCCCTCTGGACTCACTTTTATACATCGATTCCTTGGTACTGATTATTTGTTGCCATAGATATCTTGTGA
AGAGAATGGATGTAGAATGAAGAGTCCCCCTTCTATTTAGGGGACTAGATAGCTTGTGGCATATTGTACCAGCTGTTTGAAGGAGAGCCCCCTTTCGAGC
GAGGGACTTGCAGGCAGTGGGAGGGTTGAAGAGTAAACACTCTCGNATTATAGCCGCAGTCACGAATATATACATATAGAGGGTAATAATATTATAAAGA
TGATATACATACGCTGGAGCTAAAGTGAACATCAACTGAGAATCAGATCAAAAGATTCTATAACCATTGGACAGTAAATAAGTTGTGTGGTATATAGAGT
GTGTCAGGGCTGTGCTAAGTACAGGGCAACATAGATATAGAATTGAGTATAAACATTAAACTCAAGAGATCAAGGCTAGACACACAGGATTTATCTGGCC
AATGCGTCTACATGTACTTGATAAAAAGAGATGAGGGAGTACGCGTGAGTAATGTTGATAGGTGGTAGTGTAGTTAACGTGCTGTCAGTACGATCTGTTC
AATCACACCTAAAGAAAGAGAACGTGCTCTGTTTAAGCGTGATATTGTAGTGACATGACAGAAAATATAAGACAATATAAACGCGAACATATGAATTAAA
TACGACATGAGACTGAATACGTAGTCGGTCCAGGTAGTGGGATAGATTATTGAGACGTTTGTATATAGATTAATCCTTGAGAATGTAGAATATAGTATAC
AGATATCTAGGAATGACTGTGATAATGGAGAATGGATAACTTGTGGTAATAATCGGACGTGCGCGATGACGCATGACAGCTATAGAGACGTAAGTTACTA
TAAGGCTGTATGGACCAGATGATTATACGTCTAAGAGGATAGTTAGGTTATACGTACATAATATAGAGACTGAATAACGCATATTAGAGTTTGATAAACC
TATTACAGTATATATCATACGCGATGTAATAAGATATACAACATTGCTTCACTAAAATACAAACTGATGGATAAATAACATATAACAACTGTCAATAATT
AATCTTTAGTACAATATAATAACAACATATATGATGGCGACATACTCCTTGTAGTATAAATCTGAGTGACGTGGAGATGAGGTAGTGACGGAGAATAGAT
GAGTGGGAGTACGCCGCACCAAAGTCGGGTGAGAGTAGATACAAGACGTAAATAGAATAGATGCGGTGTTGTAGAGANCTGTAATACACGTGTGATATAC
GAT
>LE_HBa0184L22_SP6_126228 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184L22
Clone
Clone name
hba-184l22
LE_HBa0184L22
C08HBa0184L22
P184L22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found