Clone Read LE_HBa0195O15_SP6_127060

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0195O15_SP6_127060
Primer
SP6
ID from Seq. Facility
LE_HBa_195_O15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
42 trimmed for vector and quality, 926 raw
Sequence
>LE_HBa0195O15_SP6_127060 (raw untrimmed)
CGGCGATGGTGTGCTGGACAAAAGATGAGAGATTGAAATTGTATGTTAAAACTAGGCAATGTATCTTCATTTCATTAAGGGGGANGAGNNNNGANANNGN
NNNNANGANNCCCTTAAAAGGAAANNNANNAGAAGAGAGGAGGGNGNGGANGANAAAGAGNAAANNAAGGAAGAGAGGGANAAGANAGAGAAAGGAGAGN
GANAGAGGAGAAGAGAGNGAAGGAGAAGAGGAGAGAAGAAAAAAAAGGGAGAGAGAGAAAGGAGAGGAGGGAAGGAAAGAAAAGGAGAGAGAGGAGGAGG
AGAGGGGAGAAGAAGAAGAAAAAGAAAAAGAGGAAGAAGAGGAAGAGAAAGAGAAAAGAAGAGGGAGAGAAAAGAAAAAAAGAAAGAAAAAGAAAGAAGG
AGAAGAAGAGGGAGGAGAGAGAAGGGAAGGGGAGGGAGGGGAGGGGGGGGAGGGGGAGGGGGGGGGGGGGGAGAGGGGAGGAGGGGGGAGGGGAGGAGGA
GGGGGGGGAAAGAAAAAAAGGAGAGAGAGGGGGGGAGAAGGGANGGAGAGAAAAGAAGAAAGAGGAAGANGGAGAGGGAANAAANGAAGAAGAGGAGAAG
AGGAGAAAAAAAAAGAGAAAAGGGAGGAAGGAAGAAAAGAAAAAAAGAAGAAAAAGGGGAGAGGAAAGAAAAGAGAGGAGAGGAANGAAAGGAAGAAAAA
GAGAGGAGAGGAGAGGAGGGAGGGAGGAGGAGGAAGGAAGAGAAAAGGGAAGGGGAGGGAGGAGGAGAAAGGAGGAGGAGAAGAGAAGAGGGGAAGGGAA
GAGAGAGAAAGAAAGAGGGGAGNAGAGAANAAAGAGAGAAAAAAAGAAAAAAGGGAAAAAGAGGAAAGANAAAAAAAGAAGAAGAGGAGGAAAAACGGAA
GAAGAGAGAGGGGAGAAGGGAGGGAN
>LE_HBa0195O15_SP6_127060 (trimmed for quality and cloning vector)
GAGAGATTGAAATTGTATGTTAAAACTAGGCAATGTATCTTC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.818201
Expected error %
0.3881
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0195O15
Clone
Clone name
hba-195o15
LE_HBa0195O15
C06HBa0195O15
P195O15
Clone type
BAC
Contamination
none
Estimated length
120,541
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found