Clone Read LE_HBa0001B16_SP6_127166

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001B16_SP6_127166
Primer
SP6
ID from Seq. Facility
Le-HBa001_B16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
578 trimmed for vector and quality, 1396 raw
Genbank Accession
Sequence
>LE_HBa0001B16_SP6_127166 (raw untrimmed)
CGGCCCGCGCCTAGTGTAAATCCCCTCTACCATTGTTGAGTTCTTGCAAAATGATCCACCAATAGATGAGATCGCGTCTTCCCTTTCTTGTAATAAATTT
CAAGGTAAAATATGATGGATGACTTTATGCTTATTAAAGCCTTTATTGAGTTTTCCTCAGTTTCACTTCTGTATATTTGTGTTGTTCATAAGTGTACTCA
TTTGCTGTAGTTAATCTTTAGTGACAGACTACATTAGCACTTTGGTTTGCAATCAACTGCTTGCTCACTAGTTCTATTACATGTCACTAGAGGACTTCGT
AAAGATCTAGCTTTTTGCTCCTTAGTTGTGATTAATATGAAGTATTGTTGAATATGTTGTTCAATTTCATGATGCATGTCAACTTCAACATAATCTGACG
GGACAGTATCATTATATCTTAAAGCAGGAATACTCGAGCGATCATCATTTATGGCTTGAAATACGGAAAAATTATTTAAATAGTAAATGCATTTTAAGTT
ATGAACTAGTTCCATTAGCCACCATGGGAAACTTGGTGGTGGTTCACATTAAGAGTGATGATATTCCAGCTTTCTTCTACATCAAATTTAATCTTTTACC
CAAATGAGAAGGCATACAATCCATCTTACTTAGCCTTTGAAAGAGAAGACAGAACTTGTTCCATGTCAGGTCTATTCTCAGGATCAGGAGAGGTGAAGGA
CAAACCCAAATCTACGAAGTCCCTCCTCCTACTTCCTGTTTTCTTGGAGAAATATGAAAACAAGATTAGGATCCCCAATCGGAAACTACCTGGTTATTGC
TATTTCGCAGGGGCATTCAGAAACAATTTAGAGGAAAAGTAATGGGAAATCCTTCTGCCCCCTGTAAGACTTGTTGGCCTTCCTTTTGGAAATGTTTCCA
TTCCAAATTTCCCGAAAAGCCAAAAATATCTAATTTTTGGGGTCCCATTTTCCCGCATAAAGCCAACCTCGTTTCACAAAACAATATTTTCCGGTAATTA
GAGTCTTCTAATCAAAATTTAGAACCCCTTCTAAAAATCCCCAAAAAAAACAAATTTTCCCAAACAGGGGCCCCCTGGGACTTTTCGCGAAACAAAAAAA
GATCCGACATGTTCATCTTTAAAAAAAACCACTTTAATCAAAAATAATACGACTAAAACATTATCATACTTCTTCATAAGTGATCAGTTCATTATCTATT
TCAATAAGACAAAATTTAAACACTTTAATCTTTTTATAAATTAATATGGAGGAAAAAAAAAAAAACTCCGTTTCTTTCGTGCTTTTTTGATGTTGGTTCT
ATGTAAGAAATAATGGTCCTTATATTAGACTCATGTCTGTCTAGCGAAAATCGTCGGTAGAGTAAACTTTTTGTGGTCTTTAACATAATTCTGTAA
>LE_HBa0001B16_SP6_127166 (trimmed for quality and cloning vector)
TTGAGTTCTTGCAAAATGATCCACCAATAGATGAGATCGCGTCTTCCCTTTCTTGTAATAAATTTCAAGGTAAAATATGATGGATGACTTTATGCTTATT
AAAGCCTTTATTGAGTTTTCCTCAGTTTCACTTCTGTATATTTGTGTTGTTCATAAGTGTACTCATTTGCTGTAGTTAATCTTTAGTGACAGACTACATT
AGCACTTTGGTTTGCAATCAACTGCTTGCTCACTAGTTCTATTACATGTCACTAGAGGACTTCGTAAAGATCTAGCTTTTTGCTCCTTAGTTGTGATTAA
TATGAAGTATTGTTGAATATGTTGTTCAATTTCATGATGCATGTCAACTTCAACATAATCTGACGGGACAGTATCATTATATCTTAAAGCAGGAATACTC
GAGCGATCATCATTTATGGCTTGAAATACGGAAAAATTATTTAAATAGTAAATGCATTTTAAGTTATGAACTAGTTCCATTAGCCACCATGGGAAACTTG
GTGGTGGTTCACATTAAGAGTGATGATATTCCAGCTTTCTTCTACATCAAATTTAATCTTTTACCCAAATGAGAAGGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947807
Expected error %
0.3023
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001B16
Clone
Clone name
hba-1b16
LE_HBa0001B16
P001B16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found