Clone Read LE_HBa0001O18_SP6_127756

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001O18_SP6_127756
Primer
SP6
ID from Seq. Facility
Le-HBa001_O18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
576 trimmed for vector and quality, 1278 raw
Genbank Accession
Sequence
>LE_HBa0001O18_SP6_127756 (raw untrimmed)
CCCTTTAGTGTTAAATTTCCCTCTGCCTCTTGATCGATCAATTTCTCTTTCTCCTTGTTCTCTCTATTTTCTTTATTCATACCCTCTTTCTTTTACCCTA
ATTAGTATATAATTCTAAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTGTTAACCCCCAAGAATTTGAGTTATTAATATAAAC
CCACGAACTTTATAATTAAGGCAAGAATAGTCAACAACGTCCCTTAAAACATAACCAGAAATCCGACTTCAACTGGGATTATGCAAACTGTGACGGGCCG
TCGTGCCTGCGACACTCCGTCCTGCAGGTTGTCGCAAGAGTTAGAGAGTCAATTTCCACTGAACAATCTATGACGGTCCGTCACGCCTGTGACGGTCCGT
CCTGTCATTCCGTCACGAAGTTCAGAGAATCGATTTTCAGTACCCAATTTCATATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCGTCGTGCC
CATGACGGTCCATCGTGGGGTCCGTCGCCTCAGCCTATTTTTCCAGGTTAAAATCTGCTGCTCAAAACGACTAAACAGGTCGTTACAATAGATACAAATT
TACCCATCGTTCGTCCCCGAACGATCACAAGAAGAAAAACAAGGGGCGAGAAGGAGCACCTAAATCTTTAAACAGATGTGGGTATCTTTCTTGCATATCT
GCCTTCCTTCTCCCAAGTGGCTTCTTCAACTGGTCGAATCCTCCCATTGCACCCTTGATGGAAGCAATTCTCTCTGGACCCTCACTTGCAAACTCCTCAA
TTAAATAAACCAAAGGCCCCCCCTCAAAAAACAAATTTCTTCTCTAGCCAGACTTGATTCCCAACGGATAAAAGGTAAATTTCCTTCCCCCTGATACCTT
TTACACAAAAACACCTGGAAAACTGGAATGCCCACCCGGAAACACCCTGGGGGGCAAGGCAAACTCATAACCCCCCCCTCCTACTCCTTTAAAATTTTTA
CAAGGGTCCAATGATCCTTTAAACTAAGTTTCCCCCCATTAAATAAAAATGGTCCCCCCCTCTTAAGCAAAAGAAATCTTTCAAAAACACTGTCTACCCC
CCCCCTAAAAAAACACGACTCCCTCAACCTTTGCAATTTTAAACAATTCTTTTTTTTCACTACTTGGCCCCCCACAGAAAAGCTTTTGATTTTAAAAAAC
AACATATTCTTTTTATTTTCTATTCAAACCACCCCCTAAAAGGGTGTACAACTTCCCCCCCCACCGCCCCCGCACACC
>LE_HBa0001O18_SP6_127756 (trimmed for quality and cloning vector)
TCTTGATCGATCAATTTCTCTTTCTCCTTGTTCTCTCTATTTTCTTTATTCATACCCTCTTTCTTTTACCCTAATTAGTATATAATTCTAAATAAAAGAT
GGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTGTTAACCCCCAAGAATTTGAGTTATTAATATAAACCCACGAACTTTATAATTAAGGCAAGAA
TAGTCAACAACGTCCCTTAAAACATAACCAGAAATCCGACTTCAACTGGGATTATGCAAACTGTGACGGGCCGTCGTGCCTGCGACACTCCGTCCTGCAG
GTTGTCGCAAGAGTTAGAGAGTCAATTTCCACTGAACAATCTATGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGTCATTCCGTCACGAAGTTCAGAG
AATCGATTTTCAGTACCCAATTTCATATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCGTCGTGCCCATGACGGTCCATCGTGGGGTCCGTCG
CCTCAGCCTATTTTTCCAGGTTAAAATCTGCTGCTCAAAACGACTAAACAGGTCGTTACAATAGATACAAATTTAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.972012
Expected error %
0.3621
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001O18
Clone
Clone name
hba-1o18
LE_HBa0001O18
P001O18
Clone type
BAC
Contamination
none
Estimated length
112,080
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found