Clone Read LE_HBa0013K01_SP6_128341

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0013K01_SP6_128341
Primer
SP6
ID from Seq. Facility
LE_HBa_013_K01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
638 trimmed for vector and quality, 833 raw
Genbank Accession
Sequence
>LE_HBa0013K01_SP6_128341 (raw untrimmed)
TTTTAAGGGGCCTGCAACTTTTATTNGAGACTTCCAATGGCTGCTGCGTTTTATGGGTGATTATCTTATTAAAGAGTTCATTCAATCTCCCTAAGAAAAT
GCCTTTGATGATACACAAATCTTGAACCTAATTCTATAGATATTTGGGAGCGATTAGAGCAAGTGTTCCTTAATCGTTTCTATAGCATGAGACGTGTCGT
TAGTATGATTGAACTTACAAAGACTCGTTAAGGTGAAGATGAGTTAGTTGTTGACTTTATCAATCGCTGGAGAAGTCTGAGCCTCAACTGCAAAGATCAC
CTTAGTGAAATTCCTAGCATTGAAATGCGCATCCAAGGTATGAATTGAGGTCTTTGCTACATTTTACAAGGTTTAAAGCCCAATACATTCTAAGAGTTGA
CAACTCGTGCACATGACATAAAATTAAACATAACTTTATGTTCTTTTTTGTTCAGTGAAAAGAAGATTTAGCAATTAGAAGTTTTAAAAACAATAGAAGA
GAAGTGTAACATGTTATATTTATTTATTGTTAGAAAAATTCATTGAAGGCTTTTTCAAGATTTCATCTACTTATCAAGGTACCATTTTATTCAATTTTAC
CTATTTATATATTTTTGAAAATGTAATATAAATTGATTAAAAGATTTTATAAGAATTCTATTAAAAAGGTGTTGTATTTTATTTGTATCTGTTTTATATT
TTTGAGATATTCCAAACATTAACGTGAGCCGTACTTTGGTAGGATGGGGGTTGATATTTTGTTTTAAGGTATGTAAAATTTTTTTTTAAAAAAAATTTAT
GGGGAAAAGGCTTCGTGTTTTCGCATTTTTTTA
>LE_HBa0013K01_SP6_128341 (trimmed for quality and cloning vector)
GGTGATTATCTTATTAAAGAGTTCATTCAATCTCCCTAAGAAAATGCCTTTGATGATACACAAATCTTGAACCTAATTCTATAGATATTTGGGAGCGATT
AGAGCAAGTGTTCCTTAATCGTTTCTATAGCATGAGACGTGTCGTTAGTATGATTGAACTTACAAAGACTCGTTAAGGTGAAGATGAGTTAGTTGTTGAC
TTTATCAATCGCTGGAGAAGTCTGAGCCTCAACTGCAAAGATCACCTTAGTGAAATTCCTAGCATTGAAATGCGCATCCAAGGTATGAATTGAGGTCTTT
GCTACATTTTACAAGGTTTAAAGCCCAATACATTCTAAGAGTTGACAACTCGTGCACATGACATAAAATTAAACATAACTTTATGTTCTTTTTTGTTCAG
TGAAAAGAAGATTTAGCAATTAGAAGTTTTAAAAACAATAGAAGAGAAGTGTAACATGTTATATTTATTTATTGTTAGAAAAATTCATTGAAGGCTTTTT
CAAGATTTCATCTACTTATCAAGGTACCATTTTATTCAATTTTACCTATTTATATATTTTTGAAAATGTAATATAAATTGATTAAAAGATTTTATAAGAA
TTCTATTAAAAAGGTGTTGTATTTTATTTGTATCTGTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.923383
Expected error %
0.0905
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0013K01
Clone
Clone name
hba-13k1
LE_HBa0013K01
P013K01
Clone type
BAC
Contamination
none
Estimated length
129,371
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found