Clone Read LE_HBa0015E20_SP6_129627

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0015E20_SP6_129627
Primer
SP6
ID from Seq. Facility
LE_HBa_015_E20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
71 trimmed for vector and quality, 954 raw
Sequence
>LE_HBa0015E20_SP6_129627 (raw untrimmed)
GCTTTGCGTTCATAGTGTGTTAGTCCCGGCTCACTACCTTCATCGAGATTAGAAGTAAATCCTTTTGGAGGATTTTTGGCTTGTGTGGAGGCAAGATCTT
CCCTCCTTGACAAGATTTATGGAAAGCAGTTTAATGATGAAAAATTGATCCGGATCCGAGATCAAGTGTTGCAAGGAGAGGCTAAAGAAGCGACTGTCCA
TGAG
GAAGGTGTTTTGAGGATTAAGGGAAGGGTATGTGTACCCCGCGTTGATGATTTGATCAACACTATTCTGACAGAGGCTCATAGTTCTTGGTATTCG
ATCCAGCCGGGTACAACCCACATGTCCCGTGACCTAAAGCAACACTTTTGGTGGAGTAGAATGAAGCGTGATGTTGTGGATTTCATTGCCCAATGTCCAA
ATTGTCACGCAAGTAAAATATGAACACCAGAGGCCCGGAGGAACACTTCGCAGAATGCCCATTCCTGAGTGGAAGCGGGAAAGGATTGCAATGGATTTCG
TGGTTGGTCTTCCTGAGAACATTGGGAAAGTTTGCATTCTATTTGGGTAATTGCTGATAGGTTAACTCATTCTGCTCACTTCCTTCCGGTCAAGGTTTCT
TACAATGCAAAGAAGTTCGCCGAACTTTACATCTCGTAAGTGGTGCAACTGCATGGGGTTCCGCTCGCCAGTTCTATCAGATATAGGATCGCAGTCTACT
TCTCCGTTGTGAAAAAACTGGGCTGGCGAGTTGGGTATTAGATCGGACCAAAGTACTGCATTCCCCTATCATACTTGGTAGGCACCCGGAAGGACATTTT
CAGGAGTAGGGAGGTATTCTGTCACGCGGAGTTGTTGACCTCGGTGGCAGTGGGAAAATTTCTTTCCTTTAGTAGAGTTTCCCCCTAGCTTTGTCGCACT
TCGTTATTTGAGTGCGCTCTTTATACTTCTTAAGTGTGGCTAGGTATACTCGTT
>LE_HBa0015E20_SP6_129627 (trimmed for quality and cloning vector)
GAAGGTGTTTTGAGGATTAAGGGAAGGGTATGTGTACCCCGCGTTGATGATTTGATCAACACTATTCTGAC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.900293
Expected error %
0.9875
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0015E20
Clone
Clone name
hba-15e20
LE_HBa0015E20
P015E20
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found