Clone Read LE_HBa0018D22_SP6_131119

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0018D22_SP6_131119
Primer
SP6
ID from Seq. Facility
LE_HBa_018_D22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
718 trimmed for vector and quality, 793 raw
Sequence
>LE_HBa0018D22_SP6_131119 (raw untrimmed)
CAAAAAAAGGGGATGAAAATGAAGGTTCGAAGAGTCATTCACTCTATTTTTAAATATTCTAAAAAAAGTCGCTCTTTTATAACGATTTGTTCCCTTGGAC
CTTACATTCCTTATGAACCACAAATGGAGAATATCAACACAGTGGAAGAAGTTGATGTATATAAGGAGTATCTTCTGGGTGCTATTGGACGGGTTCAACG
ATCCAAAGTGAGCATATCTCAAAACTAATACATTTTTTACTTCTATTTCATAAGGCTAGAGACTCCGAATAAACTTAAAGCTCAATGCATGACTCACATG
ATCATGATGTATACTCTCTTACCAGGCTAATCAAGAATTTCTCAAGAGAAATAGAAATGTCATGTTAAGATTTTTTTATTATGTCATATTTTTTTCAAAC
ATCTAGTATGGAAAGTAACTATTAACATTATGATTTCTAGATGACTTTAGTCAACGTTGAGGATATGGATGTTGCATGTAATAATTAATATCGTTGAATG
ATATATATATATATATATATCAGTTTCAAACAAGTTTAATGTTGTTTCTATAAATTTGTAGAAACCAGTAGGGGATGGAAGATTTGATAAAACAAATTGG
ATCACAGTGCAGACGTAGTTGCAGGTGTCTGAACACCTGCAGCAGGAACTATGTTATATTAGTTTATATATTAAAAACATAGCAGAATCATGAATAACTT
GCATAAAGCAAGCAAGCAAAAGTGCAATTAATGTTGCATATGCCTATTATTAATGCAACTTTTATAGTTCATTGTATGATATCAAACATACAT
>LE_HBa0018D22_SP6_131119 (trimmed for quality and cloning vector)
GAAGAGTCATTCACTCTATTTTTAAATATTCTAAAAAAAGTCGCTCTTTTATAACGATTTGTTCCCTTGGACCTTACATTCCTTATGAACCACAAATGGA
GAATATCAACACAGTGGAAGAAGTTGATGTATATAAGGAGTATCTTCTGGGTGCTATTGGACGGGTTCAACGATCCAAAGTGAGCATATCTCAAAACTAA
TACATTTTTTACTTCTATTTCATAAGGCTAGAGACTCCGAATAAACTTAAAGCTCAATGCATGACTCACATGATCATGATGTATACTCTCTTACCAGGCT
AATCAAGAATTTCTCAAGAGAAATAGAAATGTCATGTTAAGATTTTTTTATTATGTCATATTTTTTTCAAACATCTAGTATGGAAAGTAACTATTAACAT
TATGATTTCTAGATGACTTTAGTCAACGTTGAGGATATGGATGTTGCATGTAATAATTAATATCGTTGAATGATATATATATATATATATATCAGTTTCA
AACAAGTTTAATGTTGTTTCTATAAATTTGTAGAAACCAGTAGGGGATGGAAGATTTGATAAAACAAATTGGATCACAGTGCAGACGTAGTTGCAGGTGT
CTGAACACCTGCAGCAGGAACTATGTTATATTAGTTTATATATTAAAAACATAGCAGAATCATGAATAACTTGCATAAAGCAAGCAAGCAAAAGTGCAAT
TAATGTTGCATATGCCTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938131
Expected error %
0.1295
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0018D22
Clone
Clone name
hba-18d22
LE_HBa0018D22
P018D22
Clone type
BAC
Contamination
none
Estimated length
97,486
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found