Clone Read LE_HBa0018H24_SP6_131315

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0018H24_SP6_131315
Primer
SP6
ID from Seq. Facility
LE_HBa_018_H24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
519 trimmed for vector and quality, 828 raw
Sequence
>LE_HBa0018H24_SP6_131315 (raw untrimmed)
AAAAAAATTTGGTTTGGTTTTATAAAGGTCAAAACTTTAATGAATTAAAGGGCATATTGTGGTGCAAAGGAAAATGTTTTTTTTTAAAGAATTTTCTTTT
TTGAAAAATAATTAAGTGGATTTTTAATTTATTTTTATATATATAAGTAATTATAATATTAATATAATAATATTTATATATAATCTAGAAAAAATGTTGT
ATGATATAGATTGAATCTGAAGGGGAGAGGGGTACGAAAAGAACAAGGGTTGGGTGTTGGCCGCGTCGAGAGGGTGGGGAAAGGATAATTAACTTGAATT
GTTATTTATGAAACTCGTTTTTCTAGAAAAAGAATTCATAATATTTTGCCCAAACAAACATTTAAAAAAAAATTATTTGCACCAAAAACACCCTAAATGG
AGAATTGTTTTTTTCTTTTTGAAACTCCGAATAATCTCACACATGAGATGTAAATCAAACTAGACAAGTGTTATACGACCAACTCCACACTAGGCAAGTT
TTATGAAATCAGACAAGTTCTATACGAACAACTCCACACTAGACAAGTTTTATGCGACCAACTGCACACTAGACAAGTTTTATGTCATCAACTCATGCCT
AAAAAGTAGGTTGAGGTTGGATTCGATCTCAGTATCTTTTTATACGGAGTCTACCCACCTCGAAACCACTTAAAGGATGCCCTTAATGGGAAAATGAAGA
AACTGTTTTAAAGGGGTGGATAATGGGAACAAAGGAATTACTTAAAAAATATTTGGTAAGTTTCCAAGAAAACCATTTATAAAAAATTAATTAAATGGAC
CCTTCAAAAAATGAAATTATTTGAGGTT
>LE_HBa0018H24_SP6_131315 (trimmed for quality and cloning vector)
TGGTGCAAAGGAAAATGTTTTTTTTTAAAGAATTTTCTTTTTTGAAAAATAATTAAGTGGATTTTTAATTTATTTTTATATATATAAGTAATTATAATAT
TAATATAATAATATTTATATATAATCTAGAAAAAATGTTGTATGATATAGATTGAATCTGAAGGGGAGAGGGGTACGAAAAGAACAAGGGTTGGGTGTTG
GCCGCGTCGAGAGGGTGGGGAAAGGATAATTAACTTGAATTGTTATTTATGAAACTCGTTTTTCTAGAAAAAGAATTCATAATATTTTGCCCAAACAAAC
ATTTAAAAAAAAATTATTTGCACCAAAAACACCCTAAATGGAGAATTGTTTTTTTCTTTTTGAAACTCCGAATAATCTCACACATGAGATGTAAATCAAA
CTAGACAAGTGTTATACGACCAACTCCACACTAGGCAAGTTTTATGAAATCAGACAAGTTCTATACGAACAACTCCACACTAGACAAGTTTTATGCGACC
AACTGCACACTAGACAAGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.929179
Expected error %
0.258
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0018H24
Clone
Clone name
hba-18h24
LE_HBa0018H24
P018H24
Clone type
BAC
Contamination
none
Estimated length
78,911
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found