Clone Read LE_HBa0018K23_SP6_131457

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0018K23_SP6_131457
Primer
SP6
ID from Seq. Facility
LE_HBa_018_K23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1287 raw
Sequence
>LE_HBa0018K23_SP6_131457 (raw untrimmed)
GCAGTATTTTGGTGGTCACAGGTACAACAATATGCTTGTCTTTTCACCATACTGCTACAATAGGATAGATATACAAGCTAATAGCGTGTTATNTNCAATA
CTGGGGTTTCCGGGTTCCCCCGCTTTTTTNAGGAGGACGTTCTAGTAGCAGGGCACTCGGTCTTGACTATACTATGGCAATCGACTCTTCTGCTGCGCAT
GTCTCTGATTCTCCGATGTGCACGGATGTAGTGTGCGTAACCGATTTTGTCATCTCTTTTGTGGAGCTTATTGGCAGTCTTCCACTGAGAGTATTAAGAA
CATGGGTAGCATCTTGTGATTGACTTGCACGAGGTCCAGGCATCCTAATACGAATACGCCTATCGGCGCTCTCACACTTACTACTATGTATTTCTTGCTA
AGTGTTATGTCTGTAAGCGTGTCATGCATGGTTACACGTCGATATTGTATAGACTATAAAATCTCGACATATTAGCCATGAATCGTGCTACCACTCACGC
AGCAGATCGAGAGAGGACTCAACCGAGGATATGTGTCAGTCTCTTGTCCTACGTTATTGCCTGTTCTGTGAGAGTTTCTCTAACACTCCTCTTTGCGATT
GTACANACATATAGCTTACTACTCGCGCTGCTATGGTAGTTCTGAATTGTCGCAGTAGAAGCTATGTGCTGCGTGCCTCGTGCTTGCACTATTCCTCTCT
ACTACGCGTCGATTCATACAACCCCTACTGACTGACACTGCCTGCTCTAGTGTACTTATGTTACCGATGGTTGGCTGTCACCGTGTTCTTCTGG
ACTGTA
CAAACGCTACCAAGGAGCATAGCTTATCGTATGCTGTCTTCGCGTAGTGTTCATGGTCCATGTCAGTATCGCTCTTTGCTTTTGACTGTTCACTCGTTAT
TATATGTTTGACTATCTAATTGTGCGTCGCTGAGTTCAATGCTCAATTGAGCTTCTCGCAGAGCTTTCTATGACAATGGTGGTTTCTTCATGACGATTAC
AATATCACGACACCATATGATGTAAAGCACTTACGCTGGTACGGTTAGNATGACATCACCGTCATCCCATCCAAATTAACTCTGCTGTCAGCTCCCGACC
GCCTGACCGACGCATGACGATAAGTACTATTGCACCGCAGTCACGTGTTTACCCGATAGAATCCTGCAGTATAGGACGTGAGTTAGTGTAACTTATCATG
ATCACGGACGGGATGAATAGTGTAGTATCGCGTCGGCGTTTATTTTGCGTGGTTCAGTAGTTCGAGCTTGTGTAATAGGTGTAGATN
>LE_HBa0018K23_SP6_131457 (trimmed for quality and cloning vector)
AC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.9031
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0018K23
Clone
Clone name
hba-18k23
LE_HBa0018K23
P018K23
Clone type
BAC
Contamination
none
Estimated length
114,726
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found