Notice: If you try to use Google Chrome to access the SGN FTP site, please check this link to resolve connection issues.

Clone Read LE_HBa0019P04_T7_132428

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0019P04_T7_132428
Primer
T7
ID from Seq. Facility
LE_HBa_019_P04-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
765 trimmed for vector and quality, 853 raw
Genbank Accession
DU049404
Sequence
>LE_HBa0019P04_T7_132428 (raw untrimmed)
CCGGGACCCGAGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTGACCCATAAATTCTCCCTCTAACCAAAACTCTCAAAGCTCTTAAGACTAC
ATTGTGAATGCTAATTAAGTTAGAAGGAACATGCCTCTATTTATAGAGTCCCAAACCTTTTCCTACCAAAAAAGGATTAGTCAATTCAAAACCTTTTCCT
AAGAAGAAAACCTATTTATGGTAAGAAATCAGGGCAAATAAAACCCAACAAATCTCCCCCTTGGCCTGAATTTCAGACAAAATAAATTTGTCCACCTTCT
TCACTTAATCTTCAACAACTTGCTTCTCCTCTCCATAATCTCCTTTGCAAAATTTATGTCTCAACACAAAGAATCTCTCTGAAACAATTTCTCCAACAAA
ATCTTCATTACTGTCAAAAAGGTTACTGCTAGAACTACACCGCCAAGATGAACACATCTTTCTAACCTGGTTCAATCATCGATTATCGAACCACTGAACC
TGACTCCGTCATTGAATATGGCTCTGATACCACTTGTTGGGACCGGAAATAAGCAAGTGTAAATGTGGAATCTAGCAAAACAAACCTCGAAAGATCACGA
GGATTAAGACAACGAGAAATATACCAAAAGACACAGAGATTTAACGTGGAGCAATCCACTATAAATATGAGAGTACAAAATACAGAGGGAAACAACCTCA
ACAAATTCACTCAGAATACATGGGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCTATAAATTCTCCCTCTAACCAAAACTCTCAAAGCTCTTA
AGACTACATTGTGAATGCTGATTAAAGTTAGAAGGAACATGGCCTCTATTTTT
>LE_HBa0019P04_T7_132428 (trimmed for quality and cloning vector)
AGCTTGTGACCCATAAATTCTCCCTCTAACCAAAACTCTCAAAGCTCTTAAGACTACATTGTGAATGCTAATTAAGTTAGAAGGAACATGCCTCTATTTA
TAGAGTCCCAAACCTTTTCCTACCAAAAAAGGATTAGTCAATTCAAAACCTTTTCCTAAGAAGAAAACCTATTTATGGTAAGAAATCAGGGCAAATAAAA
CCCAACAAATCTCCCCCTTGGCCTGAATTTCAGACAAAATAAATTTGTCCACCTTCTTCACTTAATCTTCAACAACTTGCTTCTCCTCTCCATAATCTCC
TTTGCAAAATTTATGTCTCAACACAAAGAATCTCTCTGAAACAATTTCTCCAACAAAATCTTCATTACTGTCAAAAAGGTTACTGCTAGAACTACACCGC
CAAGATGAACACATCTTTCTAACCTGGTTCAATCATCGATTATCGAACCACTGAACCTGACTCCGTCATTGAATATGGCTCTGATACCACTTGTTGGGAC
CGGAAATAAGCAAGTGTAAATGTGGAATCTAGCAAAACAAACCTCGAAAGATCACGAGGATTAAGACAACGAGAAATATACCAAAAGACACAGAGATTTA
ACGTGGAGCAATCCACTATAAATATGAGAGTACAAAATACAGAGGGAAACAACCTCAACAAATTCACTCAGAATACATGGGAGGTTCACACAAGTGATAA
CGTATCAAGCTTGTGACCTATAAATTCTCCCTCTAACCAAAACTCTCAAAGCTCTTAAGACTACA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.951942
Expected error %
0.1626
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0019P04
Clone
Clone name
hba-19p4
LE_HBa0019P04
C07HBa0019P04
P019P04
Clone type
BAC
Contamination
none
Estimated length
105,132
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found