Clone Read LE_HBa0020D05_SP6_132621

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0020D05_SP6_132621
Primer
SP6
ID from Seq. Facility
LE_HBa_020_D05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
720 trimmed for vector and quality, 985 raw
Genbank Accession
Sequence
>LE_HBa0020D05_SP6_132621 (raw untrimmed)
CAAATTAATCTACATAAGCCAATTTTATGGTAGATAACAATAGCAATATGAAATACAACATAATCGAATCATAGTCTCATCAACATCTAAACAAGATCAC
AAGACTCACATTATAGGCTAAATTGAGAAATTATAAAGATCATGGGTTCTTTATAAAATTGGATTGAAAATCATCATAGAATCAGTGATTAATCATGACT
CCATTATTAAAATGCTTTTGAAATAAATTTGACAATGAACTTATGGCTAGACTGAAAGATAGGCAATGTAATTATAGAATCACTTTGAAAAAACTTTGAA
AAAATTCCTTAGATGAAAGGTAAACTAAGGATAAATGATTATCATACCTTAACACAAGACAAACCACAAAAACTTCAAAAGAAAACACTTTGAAATCCAT
CTTCGTAGCTTGTTCTTGAGCTTAGTCTTCAATGGAGGTTTTTGGGAGTTCTTATTTGGGAGGGAAGGTTTAGATTTTAAGAATCAATTGTGAATGGCGT
TTTCATGTTATTAACCAACTTAAAATGCCTAAAATGGAAAAAAAAACCGCCCATACCTTATTTGGAACCTGAGATGAATTTCCCAATTCACCCTTCACTT
GGCAGCATTTAAGAGACAGAATTACAGGTTCATTCGACGTGCACGGTGACATACCGTCGATGGAACGACAGGGACGTCTTTCACTCTGTCGTTTTTGACT
GATACCTTATTTTTGGGGTCTGATATCACACGCCTAAGTGAGGAGCGACTCCCACCATCGACCGGGCGTACTACAATTTATGGGGCATATTTTGCATGGC
GGTTGATTGAGATTGCCAAGACAATGCCTTTGTTCCCTTTTTGGGTCCCCCTCACGACCCTTTGGGGGGACTTGGAGAGTCCGGCCCCAAAGTTTTGACC
TTTATACGACCATTTAAATTTTAGGACCTATCCTTTTTTTTTGGGCCCAAAAACATGTAAAAATGGAAAGTCCCCTGCCCATAAN
>LE_HBa0020D05_SP6_132621 (trimmed for quality and cloning vector)
AGATAACAATAGCAATATGAAATACAACATAATCGAATCATAGTCTCATCAACATCTAAACAAGATCACAAGACTCACATTATAGGCTAAATTGAGAAAT
TATAAAGATCATGGGTTCTTTATAAAATTGGATTGAAAATCATCATAGAATCAGTGATTAATCATGACTCCATTATTAAAATGCTTTTGAAATAAATTTG
ACAATGAACTTATGGCTAGACTGAAAGATAGGCAATGTAATTATAGAATCACTTTGAAAAAACTTTGAAAAAATTCCTTAGATGAAAGGTAAACTAAGGA
TAAATGATTATCATACCTTAACACAAGACAAACCACAAAAACTTCAAAAGAAAACACTTTGAAATCCATCTTCGTAGCTTGTTCTTGAGCTTAGTCTTCA
ATGGAGGTTTTTGGGAGTTCTTATTTGGGAGGGAAGGTTTAGATTTTAAGAATCAATTGTGAATGGCGTTTTCATGTTATTAACCAACTTAAAATGCCTA
AAATGGAAAAAAAAACCGCCCATACCTTATTTGGAACCTGAGATGAATTTCCCAATTCACCCTTCACTTGGCAGCATTTAAGAGACAGAATTACAGGTTC
ATTCGACGTGCACGGTGACATACCGTCGATGGAACGACAGGGACGTCTTTCACTCTGTCGTTTTTGACTGATACCTTATTTTTGGGGTCTGATATCACAC
GCCTAAGTGAGGAGCGACTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954838
Expected error %
0.284
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0020D05
Clone
Clone name
hba-20d5
LE_HBa0020D05
P020D05
Clone type
BAC
Contamination
none
Estimated length
103,704
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found