Clone Read LE_HBa0022O07_SP6_133921

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0022O07_SP6_133921
Primer
SP6
ID from Seq. Facility
LE_HBa_022_O07-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
13 trimmed for vector and quality, 639 raw
Sequence
>LE_HBa0022O07_SP6_133921 (raw untrimmed)
GGGGTAGATGTGAACTCAGGGGGGGTTCGCCGATGGGGTTTAGATTCCCCCTCGACTCTTGTTCCCACGGGGGGGGCACGTGGGGGGGGGGGAGAAAAAT
TTTCTTTTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCCCCCCTCCTGAAGGGGAGCCCCCCNGGGGAGGCAGAAAAGGGGGGTAAGAGCGGGGCGCGG
GGGCAGGCCGCGGGAGTTGGGGAAGGAACGGACAGACGGGGCCCGGCGTTTTTTTTGATTGTCGGGACCCCCCCCTTTTTGGGGGGGAAAAAAAAAAAAA
TAACCCCCCCCCCNNNNNNNTTTTTTCCCCAAAAAGGGGGAGGG
GGGGGGGGGGGGGGGGGGTTTTTTTTGTTCCGNTGTGTTTTTTTTCGCGGGCCGGG
GCGTGGCTTTTTTTTGGGGGGGGGTCCGTTCCCGTGTGGCCTGCTGCGCGCCGCGTGCTCTTTTCGGTGGTCGGTGTCGCGTTCTGTGGTTTCGGGTGTG
GGTGCGGTGTGTGGCGGGGGTGTGGGCTGTGTGTTGTGGGCGGGTGTCGTCGTCCGTCTGGCGTTTGCTTTCGGGCGTCTGCTCGCTGCGCCTCGCGTTC
GTGCGCGCCTTGTGCCTGTCTGGTCGTCCCTCCGGTCCC
>LE_HBa0022O07_SP6_133921 (trimmed for quality and cloning vector)
GGGGGGGGGGGGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.2669
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0022O07
Clone
Clone name
hba-22o7
LE_HBa0022O07
P022O07
Clone type
BAC
Contamination
none
Estimated length
97,835
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found