Clone Read LE_HBa0023C06_SP6_134111

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0023C06_SP6_134111
Primer
SP6
ID from Seq. Facility
LE_HBa_023_C06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
591 trimmed for vector and quality, 878 raw
Genbank Accession
Sequence
>LE_HBa0023C06_SP6_134111 (raw untrimmed)
TTAACGCCGTTAGTTACCTANGTNCTTNGGTAGGACAAAGTATATCATGAACTTGTTTTTTAGGTGGGAGGTGGTAGTGCAATTAGTCAAGGTGTGAGAG
ACACCATGTTTATCAAAAAAAGAAGTGCTGATTGTTTCATTGGTACATGAAAAAGATTGGGTGCTTTAGCATTTTTGATAGTACTTCATATTTCATGTAT
AAAACCTCTGCTTATTCATTCCAAAGTCAATATGAAAGAATATTGTTAAGTTTGGACTAACCAGCTACTTTCACCCTTTTGCTGTGTGTGAGAGAAGCTT
GAGGTAGGCAGAAGTGGAAAGGAAGGGCCGGTAAGGATGCAAGGTAGGAGCTGTAGTGATGAGCTAATACTGAATTCGTGTTGCTGTGGAAACTTAACAA
AGTAAAGGTTATACATTTAAGTATTAGTCACCATAGAATTACACCCTTGAGGAATAGTCGCATATAATTGGTTTCTGTATGTGAAGGACACTTTTGATTA
CTCTGCTTATTGTCTCTGAATATTAAATGACATGTCTTACCAATTAGAAGAAAATGACATATCATAGTTGAAGTTTAGGATTTGATTTAGAAGATGTTTA
ACGTTTTAGTGCTGATGTTTGAGTAAATGCAAATCTAAGTGGTTACTCTGTCACTCCTGATAATATTATGTTGGCCTATGTCTGCTGCATTTTCAATGGG
TTCTGCCTTTGGATTCTACCAAGTTACACCGAGACCTTTCATAATGAATGGTTCTTTTCCTTTGAAAGAAGTTTGCCTTCTCCCCTTTCTGAATGGCCAA
ATAAGGGAGTAAATTAATTGTAAATCCTCTTTCCCCTGCAAGCCTTCCGGTAAGGATTAAAATAGTTTGGTCCTTCGA
>LE_HBa0023C06_SP6_134111 (trimmed for quality and cloning vector)
ATCATGAACTTGTTTTTTAGGTGGGAGGTGGTAGTGCAATTAGTCAAGGTGTGAGAGACACCATGTTTATCAAAAAAAGAAGTGCTGATTGTTTCATTGG
TACATGAAAAAGATTGGGTGCTTTAGCATTTTTGATAGTACTTCATATTTCATGTATAAAACCTCTGCTTATTCATTCCAAAGTCAATATGAAAGAATAT
TGTTAAGTTTGGACTAACCAGCTACTTTCACCCTTTTGCTGTGTGTGAGAGAAGCTTGAGGTAGGCAGAAGTGGAAAGGAAGGGCCGGTAAGGATGCAAG
GTAGGAGCTGTAGTGATGAGCTAATACTGAATTCGTGTTGCTGTGGAAACTTAACAAAGTAAAGGTTATACATTTAAGTATTAGTCACCATAGAATTACA
CCCTTGAGGAATAGTCGCATATAATTGGTTTCTGTATGTGAAGGACACTTTTGATTACTCTGCTTATTGTCTCTGAATATTAAATGACATGTCTTACCAA
TTAGAAGAAAATGACATATCATAGTTGAAGTTTAGGATTTGATTTAGAAGATGTTTAACGTTTTAGTGCTGATGTTTGAGTAAATGCAAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938329
Expected error %
0.2721
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0023C06
Clone
Clone name
hba-23c6
LE_HBa0023C06
C01HBa0023C06
P023C06
Clone type
BAC
Contamination
none
Estimated length
31,696
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found