Clone Read LE_HBa0025I17_SP6_135957

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0025I17_SP6_135957
Primer
SP6
ID from Seq. Facility
LE_HBa_025_I17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
489 trimmed for vector and quality, 975 raw
Genbank Accession
Sequence
>LE_HBa0025I17_SP6_135957 (raw untrimmed)
GGAATGTTATTGAGATAGTACCATATTTGATTTCTATTTTAATTATGAGAAGAATTTATGCTTTCCACCCTTGAAGAAATTATTAAATTATCAAGTTGAA
TAGATACAAGTGATGTGTTGTTGCAA
AATTTAATTGATTGTTGCTGCTCAATTTCCTGAAATTTTTATTGTGTAATTTAGGCTCTTCATCGGACCTTAAT
AAATACAACTTCAAGGTTGATAGATTTTGCAGCAAGAAAATTAATGACTTTAATTTATCTTTTTACTACATAAATAACTGTTTTAATGATTATGTGGTGA
TATTTGATGGTTAACGGTTGTCAGTAATAGTGATACAAATTATGAAAAAGTATTTTAATAATCTGTGTCATGTGAGCACTTATGAGTGCATTTATTTCAC
TTTAAAATAGTTTAAGGGGATAATAGGACACCTATAAAATATAAATGTATAATTGAAAATTTGAATATAAATTAGCGGGGGCATTCGAACATTTTCTCTA
TTTCAAAATGTGATCATTAATTGATGATTTTATGTAATGTAAGTTTGTTTGTTTGTTTTTAGTTCATCAATCTGAGCTTATTACATCGGTGTTATCAATT
AATAACTGTTTTTAACTTGATAAAAAACGTATAATCCAAATAAAAACTTAAAAAACTAAATGTAAGCAAAATATCTCCATTAAAATCTATATTTATCGAA
CACCCAAAATTAAATAAAAATCCATCGAATGCCGTTTATGCTCCAAACCAGACCCACACTCTTCTATATTCAAAAACTGCAAACCAAATTAATTCTTAAA
AAAAAAAATTATCAAAAATTTTTTTTTTTAAAATTTAACAAACTTTTTAAACCTTTTTTATCGAAAAACCCCTTGTGAATTTTTAAATATGGTTTTTATC
TACCAAAATAAAATTTTGGGAAATCAAAATTTACCCATGGAGTTCCACTCCGCAATCAGGATCATTTAATATTTA
>LE_HBa0025I17_SP6_135957 (trimmed for quality and cloning vector)
AATTTAATTGATTGTTGCTGCTCAATTTCCTGAAATTTTTATTGTGTAATTTAGGCTCTTCATCGGACCTTAATAAATACAACTTCAAGGTTGATAGATT
TTGCAGCAAGAAAATTAATGACTTTAATTTATCTTTTTACTACATAAATAACTGTTTTAATGATTATGTGGTGATATTTGATGGTTAACGGTTGTCAGTA
ATAGTGATACAAATTATGAAAAAGTATTTTAATAATCTGTGTCATGTGAGCACTTATGAGTGCATTTATTTCACTTTAAAATAGTTTAAGGGGATAATAG
GACACCTATAAAATATAAATGTATAATTGAAAATTTGAATATAAATTAGCGGGGGCATTCGAACATTTTCTCTATTTCAAAATGTGATCATTAATTGATG
ATTTTATGTAATGTAAGTTTGTTTGTTTGTTTTTAGTTCATCAATCTGAGCTTATTACATCGGTGTTATCAATTAATAACTGTTTTTAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.898725
Expected error %
0.7506
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0025I17
Clone
Clone name
hba-25i17
LE_HBa0025I17
C08HBa0025I17
P025I17
Clone type
BAC
Contamination
none
Estimated length
125,499
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found