Clone Read LE_HBa0026G09_SP6_136613

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0026G09_SP6_136613
Primer
SP6
ID from Seq. Facility
LE_HBa_026_G09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 884 raw
Sequence
>LE_HBa0026G09_SP6_136613 (raw untrimmed)
GGTCCCCACACGGGCGCGAACTCATCTTTCTCAATAGGAACGAACGATTGAATCTTTCAATGAAATGCTCCCAACGAACTTGATTGATTTTGAGGGCGAA
TTTTTTGATT
TTTTTATTTCTTAAAAGAAATCGGGTAATTGGATATTTTATTTCGGATCGGGTCTGGGTATTTGTGAAAGATTGGGTTCAACTCGCTCTC
GCGGTGGATCAGCGGTGGCTCTGCATCTGTCTCTCTTATTTGTTTTATTATTGCTCCTCTCTTTTTCTTCTATTCTAACTCTCTCTTTTCGTCCTCTTCT
ACTCTTTGCTGTGTTCTTTTCTTTCTTCTTCGCGTTCTATAATTAGACCCCAATTCCTACGCATACCATGTCATCCGTCGCCACTGTTTTAGCTTTTTTC
TTTTCTCGCGTAACTGCTCCTTCTCATCTTTCTTGTCCCTTTGCGCTGCTACTAGCTCTTCTCTCCTCTTCTCTTCTTCTCTTATGTCTTCCTTGTCAGC
CTCTCTTATGTGTCATCCACTCGTCTCTCTTTTTCTCGTTTTTATTTCTTTTCTTGCCATGATCATTTATTGTCTGCCTGACGCTCGTGTCGACGTATCC
TACCAAGTACTTGTCGCTGCTTTTCTTCGTGCTAATGTGTACTTCGTATCTTTTTTGGTTCTTTATTTCCTCGTCTTTATGTCTCATCTTTTTGTGTGTG
ATCCACTGCGTTTCGTTATACTGTCTCTCTCCTATTATATTTCTTCTCTTTCTAGCNGTCTCTTACGCTCTGTGAGTGATATCTGCCGTGCCTGGATCGT
GTTGTGTCGTGTGTTCGTGCTTGGGATAGTACGGATGATCTTTTGTTCCCTACTACATCATTTCTCTTCGTCTCGTCCTCCTTT
>LE_HBa0026G09_SP6_136613 (trimmed for quality and cloning vector)
TTTTTA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.2404
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0026G09
Clone
Clone name
hba-26g9
LE_HBa0026G09
C03HBa0026G09
P026G09
Clone type
BAC
Contamination
none
Estimated length
89,535
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found