Clone Read LE_HBa0026H06_SP6_136655

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0026H06_SP6_136655
Primer
SP6
ID from Seq. Facility
LE_HBa_026_H06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 910 raw
Sequence
>LE_HBa0026H06_SP6_136655 (raw untrimmed)
TTTGAGAGCCACGGAGAGCGAGCGAGCGCGCGCGGGGGGGGGGAATCCCTAATTCTCTTTAAACAGTAACAATACATTTCTTCTAACTCCTCCCATTACA
CCTTTATTCATACACTACAACCANTAATTAACTCTACATCCATCCCCATACATCATCTTACTCACACACTCCCCATC
ATTACTCACCATTCAATACTTAA
TTNATATATATAATACCTACTNCAACAACATATAACACTACCTCTCAACATACATCTCATTACACTACAATCTATAAATACAAACACAATCTCTCAATCA
TTCAAACTTTCACCTAACAACCTACTCACTACCCTCTATCTCCTTCCCTTAACTATACCATTCAAATATNCTTTCACCTCCTACCCAACNAATTAAACAA
TTATTTACCCAATATACCACCATCAAAATATATACTCAAATAAAAAAATATATATCTATACAATTATCATTNCTCCATCTATTCTACTAAATAATATTAC
ATTTAACACCACTCACCAATCATTCTTCCCATAACCATTCTCCATATATACATTTCACATACACATTATAACATACCCCACTACCTATCACTCTCATCCC
TATCTTCTCCAATACTTCTTCCCCTCAAACTTCTTCAAACCTTTTCTACTCCCTCAACCCCTCCATCCCTTCCATATCCTACCTATTCCTTCTCCTCTAA
TCCCTATCCTACCTTCTCNACCCCCTCTCTCTCTCTCCACTCTCCCACCTTCCTCTCACTCTTTATTATCTCCTATTCCTTTACAATTACCTCAATTCTT
CTACTTTTTCTATTCTTTTCTCACTCCTTCTTCCTAATTTATTCTATCTCTCCCATATATATCTCCTATTCTATTTCTTCTCCTNTTCTTCACCTCCTTT
AATCTCATTA
>LE_HBa0026H06_SP6_136655 (trimmed for quality and cloning vector)
ATT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.3717
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0026H06
Clone
Clone name
hba-26h6
LE_HBa0026H06
P026H06
Clone type
BAC
Contamination
none
Estimated length
81,703
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found