Clone Read LE_HBa0027E16_SP6_137299

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0027E16_SP6_137299
Primer
SP6
ID from Seq. Facility
LE_HBa_027_E16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
684 trimmed for vector and quality, 962 raw
Genbank Accession
Sequence
>LE_HBa0027E16_SP6_137299 (raw untrimmed)
AACTTGGGTTATGTAGTTCAACTATNNTCGATACGGTATAATNTGGATCAGAGTTTCACATTCCCCTAAGATAGTATTAAAGAAAAAACATATTGTATTA
ACGGAATGTACTCAATCTCAAAAAACTCAAGTTACCCAAATGGTTTAGTTGGAGGCATGAGTCCTCATGGATGATCTTGATATTGTATTACATACTTAAT
TTAAGTATTGTTGATAAAGATTCATGTTATTTGTTGCTTATCACATGTTAAGTGATATACTTGAGTTCATACTATTTTTCATTATATATTAATTTCTTTT
TGAGGTTGGCTGATGATACCTACTCAATACATGTTGCCCCGTACTTGTGATTTTCTTTGTTTGTCCTTTGTGGAGTACAACGAGTGTACCAATGACTTCG
ACTTGTCCTCAGTTCTAGTCAATCTCCAGCATATCAGGTTCAAGGATGAATTATTCATTCAAGAATGTGTGAGATTCTCTTGGTCATGGTATGATTTCCT
TAGTTTTGGAACATAAATTTTTTTTATTCATTTATTTTTGTGTCTTTAATAATCTTAGACTTAGTATTTGAAAATTATATGTTTTTGATGTGATGACTTT
TAGATTTTCGGGATAATATGTAATAGACCTTAAAGGTTTAGTTGATTGGTTACTTTAATAAGTTTTGAAGCTTTCGCATTATTGTTGTTATTCTAGTCAA
ATTATTGGCAGATGTTTAGATTTTGAATTTCTTGATTCGCCCACTTAGGAGTTTAAGTGTGATTGTCACTCACAACTTGATTTGGGTCATGACAAAAACA
TAAAATATTTTGATCTTCTTTCTATTTGTTGTTTTTGCACGTATATGTAGGGTGGTATTAGGTGTAGATTTTGGTTGCCTTGTTTTTTTTTTTAGAAAAG
GTTATAAAGTGTTTGTGCCAAGGTTTAAAGGGGAGGGTTGAGGAAGGTATGGGGCATAATCT
>LE_HBa0027E16_SP6_137299 (trimmed for quality and cloning vector)
ACATTCCCCTAAGATAGTATTAAAGAAAAAACATATTGTATTAACGGAATGTACTCAATCTCAAAAAACTCAAGTTACCCAAATGGTTTAGTTGGAGGCA
TGAGTCCTCATGGATGATCTTGATATTGTATTACATACTTAATTTAAGTATTGTTGATAAAGATTCATGTTATTTGTTGCTTATCACATGTTAAGTGATA
TACTTGAGTTCATACTATTTTTCATTATATATTAATTTCTTTTTGAGGTTGGCTGATGATACCTACTCAATACATGTTGCCCCGTACTTGTGATTTTCTT
TGTTTGTCCTTTGTGGAGTACAACGAGTGTACCAATGACTTCGACTTGTCCTCAGTTCTAGTCAATCTCCAGCATATCAGGTTCAAGGATGAATTATTCA
TTCAAGAATGTGTGAGATTCTCTTGGTCATGGTATGATTTCCTTAGTTTTGGAACATAAATTTTTTTTATTCATTTATTTTTGTGTCTTTAATAATCTTA
GACTTAGTATTTGAAAATTATATGTTTTTGATGTGATGACTTTTAGATTTTCGGGATAATATGTAATAGACCTTAAAGGTTTAGTTGATTGGTTACTTTA
ATAAGTTTTGAAGCTTTCGCATTATTGTTGTTATTCTAGTCAAATTATTGGCAGATGTTTAGATTTTGAATTTCTTGATTCGCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.924017
Expected error %
0.1156
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0027E16
Clone
Clone name
hba-27e16
LE_HBa0027E16
P027E16
Clone type
BAC
Contamination
none
Estimated length
88,424
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found