Clone Read LE_HBa0028C05_SP6_137949

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0028C05_SP6_137949
Primer
SP6
ID from Seq. Facility
LE_HBa_028_C05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
574 trimmed for vector and quality, 971 raw
Genbank Accession
Sequence
>LE_HBa0028C05_SP6_137949 (raw untrimmed)
CTTCCTTTTATTAAGCGGAGAAAGAAAACTCTACAAATAATGGATTNGAAGAAATATTTAGTTTTGTTTACTAAAGAACCGAATGTGACGAATTAAACCA
TTCCATCAGTGTTATGAGTTGTGGACTTAGAAGCGCAAAGTAGTAATGTCGCAGAGATATTGAAATCAATTTTCTTTGTTTAATCTTTCTTCTTTTGGTG
CCTTGGAATTAAGTGTAGAATTTTCAAAAAATATAAATGGAAAATGAAGAGTTGTGATTTTTGTGAAAGTTATGATTTTTACGAAGAGTTATGACTTTCA
TGAAGAGTTCTAACTTTTATATGTGTATATAAGATAGTATAATTGAAATGAGGACAAAACGTTATTCTATTAAATATGTAGAAACATTGAATTGGTTGAG
TACAAACATTTCAATGATGGACTTGTGATTTTATTTCCTTTTATATGGTGTATTGATTGTTATATGAAGGAGAATTTGAATATCAACTTGATGTGTGTAT
GATAGAATGTGATAGAATCGTTAATTCGTTTTGATGATAGACAAAAAGCGCAAAGAACAGTAGCAAATGTACGCAGCAAAGAAGTCAAGGTAGAGTCCAA
GATCAAGTACAATAGAATTATTTTGTCAAAGCCAAAATAGTATATTGAAGGTACAAGTTAATGCAAATAAGGGAAAACCTTAAATATATTATTAAGGAAG
GAAGTTGTGTATAATTATGGATCTAAATTAAAAAAAAATCCGTGTTAAATATAACTTTCTTACCTTTTTAGAAAGGATGAACCAACACAAAACTCTTTGA
TAGGGATGCTAGCGAGAGGGAAGAAACTTCTAACTTCATGCCGAGAACAAGAAGAACCATTCCCAAATTGGGTCTGCAAAATGTAGGATTGCCCGGTTAA
ACGTTTCTGGGAAAAGGGTTTTTATGTTGCAACTCTGTGCCTGTTTTCTTCCTATTTATTTCCATTGTATT
>LE_HBa0028C05_SP6_137949 (trimmed for quality and cloning vector)
TTTTGTTTACTAAAGAACCGAATGTGACGAATTAAACCATTCCATCAGTGTTATGAGTTGTGGACTTAGAAGCGCAAAGTAGTAATGTCGCAGAGATATT
GAAATCAATTTTCTTTGTTTAATCTTTCTTCTTTTGGTGCCTTGGAATTAAGTGTAGAATTTTCAAAAAATATAAATGGAAAATGAAGAGTTGTGATTTT
TGTGAAAGTTATGATTTTTACGAAGAGTTATGACTTTCATGAAGAGTTCTAACTTTTATATGTGTATATAAGATAGTATAATTGAAATGAGGACAAAACG
TTATTCTATTAAATATGTAGAAACATTGAATTGGTTGAGTACAAACATTTCAATGATGGACTTGTGATTTTATTTCCTTTTATATGGTGTATTGATTGTT
ATATGAAGGAGAATTTGAATATCAACTTGATGTGTGTATGATAGAATGTGATAGAATCGTTAATTCGTTTTGATGATAGACAAAAAGCGCAAAGAACAGT
AGCAAATGTACGCAGCAAAGAAGTCAAGGTAGAGTCCAAGATCAAGTACAATAGAATTATTTTGTCAAAGCCAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.910797
Expected error %
0.4249
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0028C05
Clone
Clone name
hba-28c5
LE_HBa0028C05
C07HBa0028C05
P028C05
Clone type
BAC
Contamination
none
Estimated length
153,662
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found