Clone Read LE_HBa0028I20_SP6_138267

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0028I20_SP6_138267
Primer
SP6
ID from Seq. Facility
LE_HBa_028_I20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
666 trimmed for vector and quality, 981 raw
Genbank Accession
Sequence
>LE_HBa0028I20_SP6_138267 (raw untrimmed)
CAACCCGATGCCCTAGTGTATTGGTGTCGTGGTAGTTATAAGAGATTGGGAAGCTCCACACCATTATATGAAGAAGGATCCTTATATGCAGCTCATTGAA
TAGAACCGAAGACCATCTTCAGTTTATATGATATAATGTTTCTGAAATGAAGCAGGAGAGTCCATTTTAACTCTGCAATTCTCCAGTTTGGTTCCCTGTT
GCTTATTGTAGTTTTGTAGCTCTTAGTCTCGATTCTAGACTAGACTCCACGATAGAAATTGGACCATATCTTAACTCCCAAACAGCTTTCAAGGCCCAAA
AATTGTTTAGCTGAAGCAAATGGCTGACTGGGCTGGTTAGAATGGGTCAGGCTACATCATCTTGTATTGCTCCATTCCATGAATTTTGGATTATGATTCT
GTCACATGTTGATGTCTCTTGTTCTCATGGGATCTGCGAACAAGAAATCTTCTTGATTGTCTCTTGGTTTGTTTGCACAGCAATGATTTTTTACTCTTTT
TTTTTTCTTCTCAAAATGACAATATGCATATACATGGATAAGGTTCTATGCTCTGTATTTTCTGACACTGAAAATAACATGTTCTCTTTATTATCCTTAG
GTTTCAGTGTACCAATTGGGTGTCTTGGTTCATCATCTTTATTTCTTTTGATAATAACGCCAATTTATGGAAAAAAATATAATTTGTTCTGAATCCCATG
GAACCCTTGTTTGTTGTATGTCCTAATGAAGTTTGAAAAGTGAAGTTGTGATTGAATTAATGACAAATGGGTCGTTCACTCAAGAAGCATGGAATATATT
ATATTTTTCTCTGTTGCCTTAGTCCCCCCAACAATCCCCCAACTTCTCCTTACCAAATCTTATTTGTTCCTACGAAAAATAATCTTTTAAACACACCTCC
CCCAATTTTAAAAAAACCAAATTTTCATAACCAAAATTATCCTTTTCCCCCCTTTCTTTAAGGCAATAGAAAATTTGACAA
>LE_HBa0028I20_SP6_138267 (trimmed for quality and cloning vector)
CCACACCATTATATGAAGAAGGATCCTTATATGCAGCTCATTGAATAGAACCGAAGACCATCTTCAGTTTATATGATATAATGTTTCTGAAATGAAGCAG
GAGAGTCCATTTTAACTCTGCAATTCTCCAGTTTGGTTCCCTGTTGCTTATTGTAGTTTTGTAGCTCTTAGTCTCGATTCTAGACTAGACTCCACGATAG
AAATTGGACCATATCTTAACTCCCAAACAGCTTTCAAGGCCCAAAAATTGTTTAGCTGAAGCAAATGGCTGACTGGGCTGGTTAGAATGGGTCAGGCTAC
ATCATCTTGTATTGCTCCATTCCATGAATTTTGGATTATGATTCTGTCACATGTTGATGTCTCTTGTTCTCATGGGATCTGCGAACAAGAAATCTTCTTG
ATTGTCTCTTGGTTTGTTTGCACAGCAATGATTTTTTACTCTTTTTTTTTTCTTCTCAAAATGACAATATGCATATACATGGATAAGGTTCTATGCTCTG
TATTTTCTGACACTGAAAATAACATGTTCTCTTTATTATCCTTAGGTTTCAGTGTACCAATTGGGTGTCTTGGTTCATCATCTTTATTTCTTTTGATAAT
AACGCCAATTTATGGAAAAAAATATAATTTGTTCTGAATCCCATGGAACCCTTGTTTGTTGTATGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949464
Expected error %
0.1373
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0028I20
Clone
Clone name
hba-28i20
LE_HBa0028I20
C02HBa0028I20
P028I20
Clone type
BAC
Contamination
none
Estimated length
106,790
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found