Clone Read LE_HBa0028M19_T7_138458

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0028M19_T7_138458
Primer
T7
ID from Seq. Facility
LE_HBa_028_M19-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 966 raw
Sequence
>LE_HBa0028M19_T7_138458 (raw untrimmed)
AAAGAGCGAGAGTGGCACTCCCCTCTCTAAAGAGAGAGGGCACATCATCATGAATTTTNCGAAGGAGTACGACTCATCTTNATGTACTTTGGGTGGATCC
CTTAGAGGTTTGCGAGGTCTGATTACCAAAGGACAATATGTTTTGCCTCACTCTTCGTACCACACGACATACAAACCATAAAATTAATAGCATCAATAAC
CTCACAATTCGAATAGCATCAGGTACTTTGGGATCGTCCATCGAGCTCAATCTCGTCCGTGCCATCATTAGACACTGATAACTAAAAAGATAGACGTTAC
GAGACTATCTTACATCGAGTTGGCATTGTACTCTATACTTGCTCGATCTTCTTCGAATAGGAGTCTACACTGCCTATGATCATAGTCTGCGCACTACCCT
ATCCCGTCATCTAATGTTGCTTATTATGCGTCGTAGCACAAGCACAAAGTCACTGCTNGCGAACTACCTATAACTCCCGAGACTTTATAGTGTGAACCGA
ATTGGGAATGCGAATGATCTA
CGTGAGTATGAAACGAAGCCATGGCACTACCGCGATGCTCGGTCTCATCACCCCTTTCTATCACTGCTAGGCACTCCAC
GTTAACTCACACGCTCATCGACTCATTATACCCGGATCAATCGAGCACACCGATACCTACATTCTATACTTATAAACGATGACACTCAGACTAATCCTCA
CATCTCACTAACTTCTCTTCCTTGTACCATATTTCTTATGATATACTTNTATCTTTAATACCTGTCTCTCGTACTTTGTCCTCTTCCNTACTATCAGCTC
TCACCGCCCTCACCAATAATGACACGCTCCCTCGACACACCACACTATCACCTCTACATGATAACGCACGACCCCGGCTTAAACCTCCTGCCTCTTTGTA
ATCTTATTTACGCATCACACCACGCTTTCTCCGTTCACCTTTATTTGTTTGCCTCTTCTTGCTTTA
>LE_HBa0028M19_T7_138458 (trimmed for quality and cloning vector)
CGT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.7477
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0028M19
Clone
Clone name
hba-28m19
LE_HBa0028M19
P028M19
Clone type
BAC
Contamination
none
Estimated length
128,371
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found