Clone Read LE_HBa0030K12_SP6_139115

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0030K12_SP6_139115
Primer
SP6
ID from Seq. Facility
LE_HBa_030_K12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
599 trimmed for vector and quality, 854 raw
Genbank Accession
Sequence
>LE_HBa0030K12_SP6_139115 (raw untrimmed)
CCCGGAAATGGGAATCCAACGTCACCACCCTCTTACTTCTTTCAAACTGATGGAGTTGCTCTTGCATTTAATTCTCCAAATCTACATCACCTAATGCCTC
TTTCACATTCTTAGGCTCAATTGATGATATTAACGCTGAGAATGCAACTAGATTTCTTATCTTTGATCTAGTGTAAATTACAGAATTTAGAGGTGAGATG
AGATTATTAAGTGGATGTGATGATCTGTGTTTCCATCCTGGTCTCAAGGTCAACTGGTTCAGCTGATCAGTTTGCTCTTCTTTTTCAAGGAATTCTTCAT
TTTCTGGAGAGTTTGAGATATTCTGACTTATGTTCAGAATAGTACCAGGTTCCTCTTCATATTTTTCAACTTCATCAGCCTTTTTAGATGTCAATCCCCA
ACTGGTCATTTATATCAGCTTCACTTCTTTCAATTTTCTGAGAATTAAACAGCTCAATTAACGCATCTTTATCATTTGATGCAACACCTTTCAGATTTTC
ATCTTCATCAAACACAAGAATACTTTTCTTCAATACATTGAGTTCTCTTGTTGAAAATTCTGTATGCTTTACTTGATGAAGAATATCCTATAAACACTCC
TTCATCACTTCTAGGATCAAACTTCCCGCAATCATCATTTCCCTTGTTCAAAAAAAAACATTTTGCTCCAAACGTCCTAAGGTAGCTCAACATTGGTTTA
TGTTCTTAGGGAGTCTTTTTCCGTAAAAACCTTTTCCAACCTCTGTTAGTAACATGACTTGTTGTGTTGATTTGCTCATCCCAAAAACCTTTGAGGAAAA
TTTACCTCATCATTATGGGTCCTTGCAAAATTTAAAAAGGGTTTTCTTTTTCCT
>LE_HBa0030K12_SP6_139115 (trimmed for quality and cloning vector)
TACTTCTTTCAAACTGATGGAGTTGCTCTTGCATTTAATTCTCCAAATCTACATCACCTAATGCCTCTTTCACATTCTTAGGCTCAATTGATGATATTAA
CGCTGAGAATGCAACTAGATTTCTTATCTTTGATCTAGTGTAAATTACAGAATTTAGAGGTGAGATGAGATTATTAAGTGGATGTGATGATCTGTGTTTC
CATCCTGGTCTCAAGGTCAACTGGTTCAGCTGATCAGTTTGCTCTTCTTTTTCAAGGAATTCTTCATTTTCTGGAGAGTTTGAGATATTCTGACTTATGT
TCAGAATAGTACCAGGTTCCTCTTCATATTTTTCAACTTCATCAGCCTTTTTAGATGTCAATCCCCAACTGGTCATTTATATCAGCTTCACTTCTTTCAA
TTTTCTGAGAATTAAACAGCTCAATTAACGCATCTTTATCATTTGATGCAACACCTTTCAGATTTTCATCTTCATCAAACACAAGAATACTTTTCTTCAA
TACATTGAGTTCTCTTGTTGAAAATTCTGTATGCTTTACTTGATGAAGAATATCCTATAAACACTCCTTCATCACTTCTAGGATCAAACTTCCCGCAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.929877
Expected error %
0.2578
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0030K12
Clone
Clone name
hba-30k12
LE_HBa0030K12
P030K12
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found