Clone Read LE_HBa0032A18_SP6_140183

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0032A18_SP6_140183
Primer
SP6
ID from Seq. Facility
LE_HBa_032_A18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1018 raw
Sequence
>LE_HBa0032A18_SP6_140183 (raw untrimmed)
AGAAATGCCACCATCTCCATTATACACTACTCAGTACTAGACTACACATCCAAACTCACAGCCCTATTCTACATCGCACCCCCTACCAACCACACAGAAC
TCATAAAACCCTGATTAACAAGGGCACACTTCTACATTACCTCATCCTGCTCTCCATATACCAAACCTCGACCGCTAATAAACATAAGAGGACACTATAA
ATTTCGAACCACCGAAAAACTCCTTCTTAGATAACAATCACCAACCACACCACACATCTCCACGAATCTACATCCCCACCCACGCACTTATCTTCGATGC
TCATTCTACTTTACTTCACCTCCTCCATTTATTATTAAACAAGCACAAACTAGATCTCCCCTCTATAATAGTTGGTTCATAATTATTCTATTTATACAGA
ATTATGTGTCAAGCACCCTTTCAGACTTGCCTTCCACCTCATTCTTCTTTAACATACGCTTAAGTGGCTGGATTGTTCAATTGGCCCCCCCGTTCTATTA
CTTCATTACTGTTGATTGCAACATCTCATCTCCTACCCTTTTCTTCCGCCCACTTTCAGTCCAAGGAATACAGTCAAATCATATCAAAAAGTCGCCATCT
CCACTCAATGTTACTCACACAATTACTACACTATCCAACAATGACAACTACACAAAAGATTTTAATTATTCTTCATTTTCTTTTATATTCATTGATCTCT
CCTCATTCTTCTCTCATCAATACTCATATCACTGGAATTTTTTCTTCCATCCCTATCTTCTCATTTTGCATATTCTGTATCTATTTTCTCTTGCTTCGTG
CCATATCGTGTCTCTGTGGGCTGCCATCATCACCTTCTATGCTTCTATCCCTCCACCACGCGCCTGCCAACTACCCTCGGTACTCACAATATATTTTCTA
TACTGCATTTTCTCTTGCG
CCCCCTCCCTCACTCTCTTTCCTTATCCCCGCCGTTGCGACTCACCCTTCCTTTCTCCGCCTTTGTCATAATCATAATATG
GCTCTTCTGAATATTTGT
>LE_HBa0032A18_SP6_140183 (trimmed for quality and cloning vector)
CC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.7802
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0032A18
Clone
Clone name
hba-32a18
LE_HBa0032A18
C02HBa0032A18
P032A18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found