Clone Read LE_HBa0035E04_T7_141116

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0035E04_T7_141116
Primer
T7
ID from Seq. Facility
LE_HBa_035_E04-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
15 trimmed for vector and quality, 815 raw
Sequence
>LE_HBa0035E04_T7_141116 (raw untrimmed)
CGACTAGTATGAAAGACCCCCTTAATGAGGGGGAGGGACGATGTTTAAANAGACACAGTCGAATTGGTTAAAGTGATTCTAGATATTTAGCTCAGAAAAA
AATATAATAATAAAAAATAATCACCAAAAAATACGGACAACAGTATGTTAGAAGGATAACTCTAAAATGCCTAAACCCTTCGATAGAGAATTAATTGAAC
ACATACCCAACTCTGATTTATTTAAACGAATTCTTTCAGATAATATATTTATTATAGTTTAATTAAATTTCACCTAAAAATTAAATGTGCAACCTCGATA
TATAAATGATACAATGAACTTAACAAAAAACTATGCTAATGTCGCAAATATGATCTGAAACTTGTCACAATACAGAATGGGGCCATATCAGTTCCTAGCC
CTCTGAATTATGAAGTTAACTTTTTCTGGTTA
TAAAACAACTTTGGGTCAGGTGGGGACAAAACCAAATGGGTCAGTCCTTAGGGGCAACCTGACTATGC
TTAACTGCACTTCATCCTATACTTAGTGCAGGCGGTTAGACAAGTATGAACCAATTTTGAGTTGGGATTGATCCTCTCTGGAGGATAGGGTATAGAATTT
TATTTTAATGAAAAATTTGATTCAATAGTCTTATGTACTAAACTACCCACTCTAACGATGTGCCAATCGCTCTTCATCATGTCACCAGGACGTCACTTTT
CTTTCTTACTTCTTATCTGTGTTTTATCCTTTTCTCTATTATTGTTCGTTTTTTATATCTATTCTCTCCTTATTCTATTTTTTNTTTTTATTTCTTCGCC
TCTTTCTCTATCTGT
>LE_HBa0035E04_T7_141116 (trimmed for quality and cloning vector)
TAAAACAACTTTGGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.5974
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0035E04
Clone
Clone name
hba-35e4
LE_HBa0035E04
P035E04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found