Clone Read LE_HBa0036A03_SP6_141689

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0036A03_SP6_141689
Primer
SP6
ID from Seq. Facility
LE_HBa_036_A03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 856 raw
Sequence
>LE_HBa0036A03_SP6_141689 (raw untrimmed)
AAATACCCTGGTCAAGGAGAAACAAATNGAGGAAGGAATGCACCTGGGCTTCCCTTTTAACAGGGGGAGCNNTATNCAGAAAGCCNNNGGAAGAGAAACC
TACAAAGGCACGNGGTTTTNNNGGGGGGGGGGGGGGGGGGNNGGGGGGNGGGGNNGGNNNNNNGGNNGNGGAAATCCAAAGGGAGANANGAAGTTTTNNN
GANANGNGGG
GGGGGGGGAGGNGGNNANGAANNAAGAGGGAAGGGGGGGGGAANNNANANNNANNANAAGGNGAAANANAAAANGANNGNANGAANNAAN
AANNNANGNGAAGGAAANANNGAAAGGNNNGAGAGAAGNAAAGAAAGAAAGAGGAGAGGGGAAGAAGNAGANAAGANNGNNAAAGAAGAGAGAGAGAANA
GAGANGAAAGGGAAGAGGAAAAAGAGAGGGGGGGGGGGGAAAAANANNANNNAANNNAAANANANNAANAANNAANGAAAAAGAAAAGGGGAGGAGAAAG
AAAGNGGAGAGAAGGAAAGAAGANNAAAGGAGAAGANGANAAAAAGAGNGAGAAAAAAAAAAGNAAAGAGNANNAAAAGAAGGAAGAAAAAGAGGAAAGA
GGGGAGAGAGGAAGGAAGGAAAGGAGAAAGAGAAGAAGGAAAGGAAGAAAAGAGAAGGAAAGGAAAGAAAAAGAAAGAGAAAAAAAAGAGAAAGGGAAAA
GNGNGAAGAAGAAAAGAGAAAAAAAGAGGGGAGGGAGAAGAGAGAAAGGAGAAAAAGGAGAAGAGAGAAGAAAAGAGAGGAAAAAANGNAAAAGAANGAA
AGAANGNGAAGAGGGAGAAGGAAGAGAAGAAGGAGNAGAGAAGAANGAGGGAGAGG
>LE_HBa0036A03_SP6_141689 (trimmed for quality and cloning vector)
GGGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.1767
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0036A03
Clone
Clone name
hba-36a3
LE_HBa0036A03
P036A03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found