Clone Read LE_HBa0170G21_T7_14537

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0170G21_T7_14537
Primer
T7
ID from Seq. Facility
LE_HBa_170_G21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
25 trimmed for vector and quality, 1115 raw
Sequence
>LE_HBa0170G21_T7_14537 (raw untrimmed)
GCGAATACACTACTCTTAGCATTCACTCGCCGACCTAAAGTGCCCGGGAGGATCTCCTATAGGTCGTACCTCGCAGGGCATGACAAGCGTTCATGGCATA
TCTAATATGTAAGCTGCACTTTATTCAGTTAAGA
CGCAAGACGTTCAGGGGGGTGCCCACATCCGCACAACTTTATCTAGCACCACCCAGAGAAACATTA
CACTATACTCGGGGGAAGGATGTTATAGCCTTGGGAACTGAAATAATACTAGCGCGGGACGCACCCCTATTATCCATATTTGTTCGTTAGCCACTTTATT
CGTTTTCTTTGTATTTTTTTACTATTTTTTATTCTCTTTTTCTTCTTTTTTTTTCTTTTGTAAGCAGTACGATAGGAATACACCAAATGATTTTTGGTCC
AAAAATAACATTGTATCTTAATCATGAAAGTCATATAAAAAATTCTATCATAGAAAACTTATACTGTGAACAGAAAACTGAGTAAAAAAATGAAGATCTT
AGTGGATAGTGGGGAAGGCCTGGTGGTTGGGGATGAACTTTTTTCACTCAAGCGAAAAAAAGTATTCGTAATAGAGTCTCGAATAGGAGAACAAAGGTTA
TGGAATGGATAGTATATAGCTGCTGTACTATATCCTACTTCACGTGTTATGTTTGTCTTAGACTTCTTAATTATTTTCGATAGGTTCCTTTTTATTGGCT
ATGTCCACTTCTTACTTCTTTCTCTCTTAGCAAAAATACTTCGGTTGAGTTTCACGCAACGGCCAAAATAAACTGGGATAGCATATAAGCACAAGCGACT
CTACCTTCACTGCCTTGTACCGCAGGTGCCCCGATAGTGCTCTACTCCCCCCTCCTCTTCTCCTCCATCGACCCCTCATACCTTTCTTCGTCCTCCTTCT
GCTCATATTTAGACTGGCTAGTTTACAAATGTAAGCTTTTGATGTTATATTTAATTTGCATTTACACTGTATTCGCAATCATCCTTATATTTGATGTGGA
TGATGTCTGACTGTTGACTCGATTCGCGGTAGGGGTCAGTTACCTACAGTTTCACAACTCAGCGGGTGGATCTCTTATACAATGAGCATATTGTCGAGCT
GCATATTGGGTCAAC
>LE_HBa0170G21_T7_14537 (trimmed for quality and cloning vector)
CGCAAGACGTTCAGGGGGGTGCCCA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.371609
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0170G21
Clone
Clone name
hba-170g21
LE_HBa0170G21
P170G21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found