Clone Read LE_HBa0071F03_T7_15989

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0071F03_T7_15989
Primer
T7
ID from Seq. Facility
LE_HBa_071_F03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1621 raw
Sequence
>LE_HBa0071F03_T7_15989 (raw untrimmed)
GTATCTGAACCGTCAGCTCCCTATACATNCGTGCTGCACAGCACCTGGTCGAACTGAGGCACCGGCGAGAGCCATCACCTCGCAGCAAGCCACGTACNCG
TCGACACAGAGCTAGCGGTCACANGTCGTCTATCACATTACCTTGCACTGTANTNCNTGTGAGAGAGCACTCTCCCTTCTTTNATAAGGTNGGACAGATG
CATGACAGACCTGANGTACACACATGCGCGTATGCATNNGTAGAATGAGAGGCGCATCGTCCTCTGCGGATAGATAGACAGCANANAGCAAACTCGCACA
CATGGATGTATGTGAGCAAANACACTNAGAATTGCACACTCGTATACACANTTACACATAATCATATCTACACTTACATACANGTAAGNTTGCACGCAGA
TACAGTAGCTCTCGAGCAGATGTAGCTATAGGTACACACTCGAGCACTGATA
TATGTAATCATATGCAGACAGATGCAGATACAGAGATACTGGTACCAC
TACACATGCAGCGACACATAGTGGGAGTGCNGTACANGAAGACAGATAGACTCGTACATGCATGTAGACACAGAGACACATAAAGTCTCGCTATCGGCGT
ATACGAAGACACATGCACCCACGGACGTAAGAATGNANGNATGCACGGATAATACAGTCGCACATACGCATACGCAGAGACACGTAACTATATATCGACG
CGTAATGATANGCATAGACAGTACTGACTCCTACCTCCTATACTATGCCTACGACTCANGTACAGGGAAGCAGACACAGTCGCTAGCTNTNTCTCGTGCT
NCTCATTCGTGCCTAGACATGACATCNGCAGATAATGTCACACTAGCCCTTACTATCCTACTCACTCTCAGATACCTCACGACACATGACGCCACCTCTA
CTTNTTCACTCGTTGGTCTGCCNTCTGTATCTATAACTCTCACTGTCGCACCTCACTACACATGACACGCAAGCGCATACTCCGAGAGCTCTGCCTGTGA
CCTCGCCTGTCGCCACCCAGTGTCTGACAGCCTCCACTCATCTCACGCCTTGAGACATACATACTCTCGCTCTCTTGCGCGAATTCGGGCGCTATATCCT
ATATACCGCTCTCTCACATACAACTACTGGTCGNCAGTCGTGAGTACTACGGCTTTCTTAGGCCNCGATCATGCTCCCCGAGCCTACAGCTCATACTGAA
GTACCTCTACTAACTCCTCTCGCACAACCTGTCGTTGTTTCCNTGACCTCATACATACTTCAACATGTATGACTCACACTCCGCTCACGGAAACANAGTC
CNGACGCCATCCGTCTCAACACTCCTCACCTGGCAACGCCATCACCGCATTGCACACCCTACACCCCGCGCCTTNCTCCACNAACTAGCCCGACCATCTT
CACGCCTACTTCCGCTATCACTACTTAAGACAACACTGCACACTAACAGACTATCCTACACCTTGCCNACTCGGCGCGGCATTGTGGCTTATGCTTACGC
GGAATTGCGACACTGGAACGNCAGTGCTATCGCGGTTCCTGACGATGCGACTAGACATCATGCGGTGCCTGTTGCTACCGCCTGCGCGCGTAANCCATAT
CGTGTTCGTCTCGACCATAAA
>LE_HBa0071F03_T7_15989 (trimmed for quality and cloning vector)
TAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.525301
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0071F03
Clone
Clone name
hba-71f3
LE_HBa0071F03
P071F03
Clone type
BAC
Contamination
none
Estimated length
97,767
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found